Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01697 ATGGACGCCGTGGTTAAGTCGCCGGAAAATTCATCGCGGCCCATCGAGAAGGTGACCGTACACCCTCTGGTTCTTCTAAGCACCGTCGATCACTACATTCGGCTCTCCCAGTGTACGCTTGAGCGGGTCGTCGGAGTCTTGCTCGGCAGCTCCTTTGAAGGCACTGTCGATGTTTCCAACAGCTATGCTGTTCCTTTTGATGAAGACGACATGGACCCAAGTGCCTGGTTCCTCGACCTCAACTATGTCGAGAGAATGTTTTCTATGTTCAAGAAAATAAATGCTAAGGAGCAAATTGTGGGATGGTACAGCACAGGCCCAGAACTTCGAGAGAATGATATGGACATTCACAGCTTATTTCACAAATATGTTCCAAATCCGGTCTTGGTCATTGTTGATGTGATATCTACAGAGCTTGGTATACCCACAAAAGCTTATTACTGTGATGTTGAAGAAGTGAAGGAGAATGCTACTACAAAAACAAGTCAGAAGGTTTTTGTTGATGTCCCTTTTGAAATTGCTGCTGATAATGAGGCTGAGGAAATTCAAGTTGAACGCTTGTTAACAGATGTGGAGGATACACTTGAAACTGAGGTTTCCCTGCTCACTTCCCTTTCTCCTTTAAATTTTCCACTTGTGTTCGTCTATCTCCTCCATCGGAAGCGGATATTCTCATAA 678 0.4484 MDAVVKSPENSSRPIEKVTVHPLVLLSTVDHYIRLSQCTLERVVGVLLGSSFEGTVDVSNSYAVPFDEDDMDPSAWFLDLNYVERMFSMFKKINAKEQIVGWYSTGPELRENDMDIHSLFHKYVPNPVLVIVDVISTELGIPTKAYYCDVEEVKENATTKTSQKVFVDVPFEIAADNEAEEIQVERLLTDVEDTLETEVSLLTSLSPLNFPLVFVYLLHRKRIFS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01697 225 SMART pad1_6 17 151 IPR000555 GO:0005515|GO:0008233|GO:0008237
Accr6g01697 225 ProSiteProfiles MPN domain profile. 18 156 IPR037518 -
Accr6g01697 225 Gene3D Cytidine Deaminase, domain 2 10 197 - -
Accr6g01697 225 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 16 125 IPR000555 GO:0005515|GO:0008233|GO:0008237
Accr6g01697 225 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 11 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01697 Accr-Chr6 51515613 51517615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01697 20 193 Eukaryotic Initiation Factors Gene Family AT2G39990 33.854 1.04e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01697 K03038 - qsa:O6P43_016640 273.092