Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01696 ATGGACGCCGTGGTTAAGTCGCCGGAAAATTCATCGCGGCCCATCGAGAAGGTGACCGTACACCCTCTGGTTCTTCTAAGCACCGTCGATCACTACATTCGGCTCTCCCAGTGTACGCTTGAGCGGGTCGTCGGAGTCTTGCTCGGCAGCTCCTTTGAAGGCACTGTCGATGTTTCCAACAGCTATGCTGTTCCTTTTGATGAAGACGACATGGACCCAAGTGCCTGGTTCCTCGACCTCAACTATGTCGAGAGAATGTTTTCTATGTTCAAGAAAATAAATGCTAAGGAGCAAATTGTGGGATGGTACAGCACAGGCCCAGAACTTCGAGAGAATGATATGGACATTCACAGCTTATTTCACAAATATGTTCCAAATCCGGTCTTGGTCATTGTTGATGTGATATCTACAGAGCTTGGTATACCCACAAAAGCTTATTACTGTGATGTTGAAGAAGTGAAGGAGAATGCTACTACAAAAACAAGTCAGAAGGTTTTTGTTGATGTCCCTTTTGAAATTGCTGCTGATAATGAGGCTGAGGAAATTCAAGTTGAACGCTTGTTAACAGATGTGGAGGATACACTTGAAACTGAGATTCTGAACCTGGAACTTGAGAAAGTTGAAGATTAA 630 0.4444 MDAVVKSPENSSRPIEKVTVHPLVLLSTVDHYIRLSQCTLERVVGVLLGSSFEGTVDVSNSYAVPFDEDDMDPSAWFLDLNYVERMFSMFKKINAKEQIVGWYSTGPELRENDMDIHSLFHKYVPNPVLVIVDVISTELGIPTKAYYCDVEEVKENATTKTSQKVFVDVPFEIAADNEAEEIQVERLLTDVEDTLETEILNLELEKVED 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01696 209 SMART pad1_6 17 151 IPR000555 GO:0005515|GO:0008233|GO:0008237
Accr6g01696 209 ProSiteProfiles MPN domain profile. 18 156 IPR037518 -
Accr6g01696 209 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 11 200 - -
Accr6g01696 209 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 16 125 IPR000555 GO:0005515|GO:0008233|GO:0008237
Accr6g01696 209 Gene3D Cytidine Deaminase, domain 2 10 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01696 Accr-Chr6 51515314 51517615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01696 6 193 Eukaryotic Initiation Factors Gene Family AT2G39990 32.039 5.92e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01696 K03038 - qsa:O6P43_016640 273.092