Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01695 ATGGACAACGTGGCTAAGGCGCCTGAAAGTTCATCGATTCCCGTCAAGAATGTGATAGTACACCCTCTCGTTCTTCTAAGCGTTGCCGATCACTACCATCGGAATTACGGGGACTCCAAGTCACCGATCGAGCGGGTAGTCGGAGTCTTGCTCGGCACCTCCTTCCAAGGCACTGTTGAAGTTTCCAACAGCTATGGAGTTCCTTTTGAGGAAGACACAAAGGACCCAAGTTTGTGGTTCCTTAACTGCGACTACGCCGAGAAAATGTTTTCTTTGTCCAAGAAAGTAAACGCTACGGAGCATATTGTGGGATGGTATAGTACAGGCCCAAAACTTCGAGGGATAGATATGCACATCCACAGATTATTCCACAAATATGTTCCAAATCCAGTCTTGGTCATTGTTGATGTGCGAACAACGGAGAAAAGTTTACCCATAAAAGCTTTCTGTGATGTTGAAGAATCGAAGAAGAATGCTACAGAAATAGGTCGAAATGTTTTTGTTCATGTCCCTTCTGAAATTATTGCTGATGAGACTGAGGAAATTGGAATTGAACACTTGCTAAGAGAAGTGAAACATACGACCATCAGTACACTTGAAACTGAGGTTTCTGATAAACTTTCAGCCTTAAAGGAATTACATACTCTCTTAAAAGACAAAATATGTTGGTACCTCGGTATGGCTGTTACGGGATTTTTACCATCAAACCGTGAGATACTTTGGAGTGTGCAGGATATGCTAAACTATTTTCCGGATCCCAATGACCCTGAGTTAATCAAGGCCCTTGCAGTAAAAACAAACGACATGATGATGGTCCTATTTCTATGCTCTATCCTCCGCTGTGTCATTGCGCTTCACAACTTGATAAACAATAAGATAATGAACCAGGAACTCGAGAAAGCTTAA 906 0.4238 MDNVAKAPESSSIPVKNVIVHPLVLLSVADHYHRNYGDSKSPIERVVGVLLGTSFQGTVEVSNSYGVPFEEDTKDPSLWFLNCDYAEKMFSLSKKVNATEHIVGWYSTGPKLRGIDMHIHRLFHKYVPNPVLVIVDVRTTEKSLPIKAFCDVEESKKNATEIGRNVFVHVPSEIIADETEEIGIEHLLREVKHTTISTLETEVSDKLSALKELHTLLKDKICWYLGMAVTGFLPSNREILWSVQDMLNYFPDPNDPELIKALAVKTNDMMMVLFLCSILRCVIALHNLINNKIMNQELEKA 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01695 301 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 15 128 IPR000555 GO:0005515|GO:0008233|GO:0008237
Accr6g01695 301 CDD MPN_RPN7_8 16 300 IPR033858 GO:0005838
Accr6g01695 301 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 9 293 - -
Accr6g01695 301 Pfam Maintenance of mitochondrial structure and function 178 290 IPR024969 -
Accr6g01695 301 SMART pad1_6 17 154 IPR000555 GO:0005515|GO:0008233|GO:0008237
Accr6g01695 301 ProSiteProfiles MPN domain profile. 18 155 IPR037518 -
Accr6g01695 301 Gene3D Cytidine Deaminase, domain 2 10 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01695 Accr-Chr6 51511984 51514335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01695 7 251 Eukaryotic Initiation Factors Gene Family AT2G39990 29.719 3.38e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01695 K03038 - cave:132191715 363.614