Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01694 ATGGACACCGTGGTTAAGTCGATGGAAAATTCATCGATTGCCGTCAAGAATGTGATAGTACACCCTCTGGCTCTTCTAAGCGCCCTCGATCACTTCTTTCGGGACGCTACCCACACCCCGGAGCCGGAGGAACAGTTCGGGCGGGTGGTCGGAGTCTTGCCCGGTAGCTCCTTTAAAGGCACTGTCCAAGTTTCCAACAGCTATGGAGTTCCTTTTGAGGAAAACGAAGACAACCCAAGTGTCTAG 246 0.5244 MDTVVKSMENSSIAVKNVIVHPLALLSALDHFFRDATHTPEPEEQFGRVVGVLPGSSFKGTVQVSNSYGVPFEENEDNPSV 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01694 81 ProSiteProfiles MPN domain profile. 18 81 IPR037518 -
Accr6g01694 81 Gene3D Cytidine Deaminase, domain 2 4 81 - -
Accr6g01694 81 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 14 78 IPR000555 GO:0005515|GO:0008233|GO:0008237
Accr6g01694 81 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 13 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01694 Accr-Chr6 51501722 51502343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01694 7 81 Eukaryotic Initiation Factors Gene Family AT2G39990 35.526 9.62e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01694 K03038 - sly:101267337 81.2629