Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr6g01677 | ATGCTTCAGATTCGGCTTAGTAAGGTTTCTTCCTCTGAGGGTTTAGCTGGGGTGAAGCCCTCACCTGTTGAGACTGTTACAGTCACTTGTCCCGATCATCTAGTCCTTGCTGATCTTCCTGTAGCAAAGGGCATTGGTTCAGCAACTGCTACTTCTCTGGTGAAGACTCTTGGTCGTAGATCTCGCCGCCAATGTGGTGATTGTGTCCACTTCTGTGTTCGTTGTGACTTCCCAATTGCAATCTATGGACGGCTGAGCCCTTGTGACCATGCCTTCTGTCTTGATTGTGCTAGAAGTGATTCAATATGCTACTTGTGTGATGAACGAATCCAGAAAATTCAGACAATCAAAATGTTAGAAGGAATATTCATCTGTGCAGCTCCTCACTGCTTCAAGTCTTTCTTGAAGAAGTCAGAATTTGAAATGCATATCCAAGATTTACATGCTGACCTTCTCCGTCTCCGTCCCAATGTAGATAAAGAAGATGGAAATGAGTCAGAGACGCCCAGTGTTCGACAATCTGCAATGTCAGATTCCTCTGCTCGAGCTCCCCAAAGGCCTGTTTTCTCTCCTGGTTCAAATTCCCAGCTACATGATCGAGAAGACAAGGCTCGTCAGCAACCGCCAAGAGACCAGCCACCTTCAAGGCCGACTTTGCAGCCGAAGCTGCCTTCTTTTGGACAAGTTCAAAATCACTCTACAGATCCTCAGTCTGGCTCTAATGGAGCTATTCCGCAGGGCTTTTATCAACAAAGTTCTGACATGCAGCGACCTCCACAAGATCCTTCCCAGTTTACAGATGGCCACCGAGGAGCCACACCGGATACACCGCTCCCTGATTATCCACCCATGCATTCCTCCCAGACACCCAATTTCCCAGTGCCAGTGAATGGTAACCCAATGTTGAATCCTCCTATGCCATTTGGTTATCCTCCATACCCCCCGCACGACGGAGCTCCACCATTTTATGTGAACCCCTATGATATGCGTTGGCAGGACTCAGCTTCTGAAGGAGGTGGAGACCAGAATTCCTTACTTGGTTTTCCACCGGGCGCTCCAACTGGCCCTAATTTTCCAGCAAATTATCCTCAGCCCATGAATGCAGGACCTGGTGGCCCACCTTTTGAGCAAGGACACGGTGGCATGGCTATGGATCCGCGAGACGGTAAAGGGATATTGCCACCACAGTCCATGACCCTCCCACCTCCACCGCCATTGCCACCCATGTCTCATCTGAACAATAAGTATTATTCCGGTGAGTTTGGACACAATGGACATGGTTATGGTTGGCCGCATGATAATCGTGAAGCATTTGGTGGTCAGGACTAG | 1329 | 0.4891 | MLQIRLSKVSSSEGLAGVKPSPVETVTVTCPDHLVLADLPVAKGIGSATATSLVKTLGRRSRRQCGDCVHFCVRCDFPIAIYGRLSPCDHAFCLDCARSDSICYLCDERIQKIQTIKMLEGIFICAAPHCFKSFLKKSEFEMHIQDLHADLLRLRPNVDKEDGNESETPSVRQSAMSDSSARAPQRPVFSPGSNSQLHDREDKARQQPPRDQPPSRPTLQPKLPSFGQVQNHSTDPQSGSNGAIPQGFYQQSSDMQRPPQDPSQFTDGHRGATPDTPLPDYPPMHSSQTPNFPVPVNGNPMLNPPMPFGYPPYPPHDGAPPFYVNPYDMRWQDSASEGGGDQNSLLGFPPGAPTGPNFPANYPQPMNAGPGGPPFEQGHGGMAMDPRDGKGILPPQSMTLPPPPPLPPMSHLNNKYYSGEFGHNGHGYGWPHDNREAFGGQD | 442 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr6g01677 | 442 | MobiDBLite | consensus disorder prediction | 159 | 298 | - | - | |
Accr6g01677 | 442 | FunFam | E3 ubiquitin-protein ligase Hakai | 69 | 123 | - | - | |
Accr6g01677 | 442 | CDD | RING-HC_HAKAI-like | 70 | 119 | IPR040380 | - | |
Accr6g01677 | 442 | ProSitePatterns | Zinc finger RING-type signature. | 88 | 97 | IPR017907 | - | |
Accr6g01677 | 442 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 123 | 149 | IPR013087 | - | |
Accr6g01677 | 442 | MobiDBLite | consensus disorder prediction | 221 | 270 | - | - | |
Accr6g01677 | 442 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED | 1 | 430 | IPR040383 | GO:0016567|GO:0061630 | |
Accr6g01677 | 442 | MobiDBLite | consensus disorder prediction | 374 | 442 | - | - | |
Accr6g01677 | 442 | MobiDBLite | consensus disorder prediction | 168 | 195 | - | - | |
Accr6g01677 | 442 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 69 | 123 | IPR013083 | - | |
Accr6g01677 | 442 | MobiDBLite | consensus disorder prediction | 396 | 410 | - | - | |
Accr6g01677 | 442 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 125 | 148 | IPR013087 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr6g01677 | 1 | 439 | C2H2 Transcription Factor Family | AT5G01160 | 46.309 | 1.32e-110 | 328 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr6g01677 | K15685 | - | gmx:100817582 | 597.43 |