Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01677 ATGCTTCAGATTCGGCTTAGTAAGGTTTCTTCCTCTGAGGGTTTAGCTGGGGTGAAGCCCTCACCTGTTGAGACTGTTACAGTCACTTGTCCCGATCATCTAGTCCTTGCTGATCTTCCTGTAGCAAAGGGCATTGGTTCAGCAACTGCTACTTCTCTGGTGAAGACTCTTGGTCGTAGATCTCGCCGCCAATGTGGTGATTGTGTCCACTTCTGTGTTCGTTGTGACTTCCCAATTGCAATCTATGGACGGCTGAGCCCTTGTGACCATGCCTTCTGTCTTGATTGTGCTAGAAGTGATTCAATATGCTACTTGTGTGATGAACGAATCCAGAAAATTCAGACAATCAAAATGTTAGAAGGAATATTCATCTGTGCAGCTCCTCACTGCTTCAAGTCTTTCTTGAAGAAGTCAGAATTTGAAATGCATATCCAAGATTTACATGCTGACCTTCTCCGTCTCCGTCCCAATGTAGATAAAGAAGATGGAAATGAGTCAGAGACGCCCAGTGTTCGACAATCTGCAATGTCAGATTCCTCTGCTCGAGCTCCCCAAAGGCCTGTTTTCTCTCCTGGTTCAAATTCCCAGCTACATGATCGAGAAGACAAGGCTCGTCAGCAACCGCCAAGAGACCAGCCACCTTCAAGGCCGACTTTGCAGCCGAAGCTGCCTTCTTTTGGACAAGTTCAAAATCACTCTACAGATCCTCAGTCTGGCTCTAATGGAGCTATTCCGCAGGGCTTTTATCAACAAAGTTCTGACATGCAGCGACCTCCACAAGATCCTTCCCAGTTTACAGATGGCCACCGAGGAGCCACACCGGATACACCGCTCCCTGATTATCCACCCATGCATTCCTCCCAGACACCCAATTTCCCAGTGCCAGTGAATGGTAACCCAATGTTGAATCCTCCTATGCCATTTGGTTATCCTCCATACCCCCCGCACGACGGAGCTCCACCATTTTATGTGAACCCCTATGATATGCGTTGGCAGGACTCAGCTTCTGAAGGAGGTGGAGACCAGAATTCCTTACTTGGTTTTCCACCGGGCGCTCCAACTGGCCCTAATTTTCCAGCAAATTATCCTCAGCCCATGAATGCAGGACCTGGTGGCCCACCTTTTGAGCAAGGACACGGTGGCATGGCTATGGATCCGCGAGACGGTAAAGGGATATTGCCACCACAGTCCATGACCCTCCCACCTCCACCGCCATTGCCACCCATGTCTCATCTGAACAATAAGTATTATTCCGGTGAGTTTGGACACAATGGACATGGTTATGGTTGGCCGCATGATAATCGTGAAGCATTTGGTGGTCAGGACTAG 1329 0.4891 MLQIRLSKVSSSEGLAGVKPSPVETVTVTCPDHLVLADLPVAKGIGSATATSLVKTLGRRSRRQCGDCVHFCVRCDFPIAIYGRLSPCDHAFCLDCARSDSICYLCDERIQKIQTIKMLEGIFICAAPHCFKSFLKKSEFEMHIQDLHADLLRLRPNVDKEDGNESETPSVRQSAMSDSSARAPQRPVFSPGSNSQLHDREDKARQQPPRDQPPSRPTLQPKLPSFGQVQNHSTDPQSGSNGAIPQGFYQQSSDMQRPPQDPSQFTDGHRGATPDTPLPDYPPMHSSQTPNFPVPVNGNPMLNPPMPFGYPPYPPHDGAPPFYVNPYDMRWQDSASEGGGDQNSLLGFPPGAPTGPNFPANYPQPMNAGPGGPPFEQGHGGMAMDPRDGKGILPPQSMTLPPPPPLPPMSHLNNKYYSGEFGHNGHGYGWPHDNREAFGGQD 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01677 442 MobiDBLite consensus disorder prediction 159 298 - -
Accr6g01677 442 FunFam E3 ubiquitin-protein ligase Hakai 69 123 - -
Accr6g01677 442 CDD RING-HC_HAKAI-like 70 119 IPR040380 -
Accr6g01677 442 ProSitePatterns Zinc finger RING-type signature. 88 97 IPR017907 -
Accr6g01677 442 ProSiteProfiles Zinc finger C2H2 type domain profile. 123 149 IPR013087 -
Accr6g01677 442 MobiDBLite consensus disorder prediction 221 270 - -
Accr6g01677 442 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 430 IPR040383 GO:0016567|GO:0061630
Accr6g01677 442 MobiDBLite consensus disorder prediction 374 442 - -
Accr6g01677 442 MobiDBLite consensus disorder prediction 168 195 - -
Accr6g01677 442 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 123 IPR013083 -
Accr6g01677 442 MobiDBLite consensus disorder prediction 396 410 - -
Accr6g01677 442 ProSitePatterns Zinc finger C2H2 type domain signature. 125 148 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01677 1 439 C2H2 Transcription Factor Family AT5G01160 46.309 1.32e-110 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01677 K15685 - gmx:100817582 597.43