Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01595 ATGTGGACAACGAAGAGGAAGTACTCTTTGAGTTCTTGTAATGATCTGATAACTTCATCAACAACAAAACCCTCTTCTTGTTCTTATGATGATTCTTCATGGGAAGAACAAGCTTTCGCCGAAGACGCTTCGGGGCCTCTTGGTGGATGCATATGGCCGCCCAGATCATATACTTGCAGCTTCTGTAGAAGAGAGTTCAGATCAGCTCAAGCTCTTGGAGGCCACATGAATGTTCATAGAAGAGATAGAGCCAGACTCAAACAGCCTTCAAGCCCACAAAACAACAATGAACTTCATCATCAAATTCCAAATACTTCTTCTTCTTCCTTTATGGGTTTCATATACCCCTACAATAATAATGATTTTTCTCCTACTAACCCTAATTCTGTTCTTGTTGCTTCACTTTCTTCTAATATGGCTTTAGCTCCATCTTCAAACATTGCTTATAATTCTTCTTCTATTGTTCCCCCACCACAAGGACATAGGGTTGTGGCGTCTAATTATTCTTCTTCGAACTGGCCAAACTTGGCTGAAGCAGAAGAAGCTGAGAAGATCACAGAGGTATTGGATCGTGAGTGCGATCATGAGGATAATGGAAAATCTGATTTGGCTTTTAGTTTAAATTTGGTGGTGTCTAGAGGTATTGAGACAAAGGAGGAAGATATAATTAGTTGCAAGAAGAGAAGAACTTGTGAAACTTCATCGATTCTTCCTCTCTTCCCAGCTTCAAATTCTTCAACTGAATTGATTATTAGCCCTAGCCCCAAAGAAGAGCTAGATCTGGAGCTAAGGCTGGGTCAAAGCAAGCACAAGGTATAG 819 0.4066 MWTTKRKYSLSSCNDLITSSTTKPSSCSYDDSSWEEQAFAEDASGPLGGCIWPPRSYTCSFCRREFRSAQALGGHMNVHRRDRARLKQPSSPQNNNELHHQIPNTSSSSFMGFIYPYNNNDFSPTNPNSVLVASLSSNMALAPSSNIAYNSSSIVPPPQGHRVVASNYSSSNWPNLAEAEEAEKITEVLDRECDHEDNGKSDLAFSLNLVVSRGIETKEEDIISCKKRRTCETSSILPLFPASNSSTELIISPSPKEELDLELRLGQSKHKV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01595 272 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Accr6g01595 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
Accr6g01595 272 Pfam C2H2-type zinc finger 57 81 - -
Accr6g01595 272 PANTHER OS07G0101800 PROTEIN 29 268 - -
Accr6g01595 272 MobiDBLite consensus disorder prediction 80 101 - -
Accr6g01595 272 Gene3D Classic Zinc Finger 54 110 - -
Accr6g01595 272 SMART c2h2final6 57 79 IPR013087 -
Accr6g01595 272 SUPERFAMILY beta-beta-alpha zinc fingers 54 83 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01595 Accr-Chr6 49614884 49615702 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01595 31 88 C2H2 Transcription Factor Family AT2G37740 81.034 2.43e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr6g01595 zf-C2H2_6 4.8e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01595 - - pcin:129289629 351.673