Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01594 ATGGAGTTTGGCCTTAAAAACAAAGACAAATCTGAGAGAATAAGGTGGGGTTATTCCTCAGAGGAAGCAACACAAGTAAGATCCTATACTTGTGCTTTTTGTCAGAAAGGGTTTTCAAACGCACAAGCTCTTGGTGGTCACATGAACATTCACAGAAGAGATCGAGCCAGGCTGAGGCAACAATATTCTCTTGACACAAACCCTAATAATGATCTTCATCATCAGAACCCAGATGATGATATTAATCATAAAAAGCCATCAATTTTTCCAGAGGCAAAGGTCAATATGGGTATTTCCTCAGAAATTTCTTCTCAGCTTCCTATTTTTTTCGGCGTAGAAGAGAAGATGGAGTTGGACCTTGAACTTCGGTTGGGTCCTGAGCCAGTAAAGCAGACACCACCGATTCTGAGACGATTCTTTTGA 423 0.409 MEFGLKNKDKSERIRWGYSSEEATQVRSYTCAFCQKGFSNAQALGGHMNIHRRDRARLRQQYSLDTNPNNDLHHQNPDDDINHKKPSIFPEAKVNMGISSEISSQLPIFFGVEEKMELDLELRLGPEPVKQTPPILRRFF 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01594 140 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Accr6g01594 140 MobiDBLite consensus disorder prediction 56 87 - -
Accr6g01594 140 MobiDBLite consensus disorder prediction 72 87 - -
Accr6g01594 140 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Accr6g01594 140 PANTHER OS07G0101800 PROTEIN 11 85 - -
Accr6g01594 140 Gene3D Classic Zinc Finger 7 85 - -
Accr6g01594 140 SUPERFAMILY beta-beta-alpha zinc fingers 26 56 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01594 Accr-Chr6 49603742 49604164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01594 25 131 C2H2 Transcription Factor Family AT3G09290 41.007 1.88e-19 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr6g01594 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01594 - - pcin:129297188 209.92