Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01578 ATGGACGAAGATGGTTTGGGTGCTGATCGTGAGGATGGGTTCCAGACTGATGATGAAGAAAACCTAGGGTTTAGGGTTTTCGAACATTCAAGTTCTGATGAGACCGATTCAGATAATGCCAAACCTAATTTTTCCAACGAAAATGACGACGACGATGATGTCGGGGTACCTATTCCTTTGTGGCCTCAAAGCTATCGGCAATCTATGGACATGTTAACCAGTGTAACACCACCTTCAATGAGTTTGCTAAGGCAAATAAGTGAATCAAATCGATCAGTCACGAGGCATCGGAATAATGATGATGATTCTGATTTAAAGACAGCCTTAATTCCTGAAACAATCTTAGTGACACAAGATGATCAGCCTCCTACCTCCAATAATGGCTCCAGAATTTCTATATTATCTAACCCCGCTAAATATTCTAGCTGTGATCATTTACCACCAGCTCTAGAGCAATCTTCATTAGCACAGTCAATTCTTAATGGAGCCAATGTACTATGTGGAATAGGACTTCTTACAACACCTTATGCACTAAAAGAAGGTGGATGGTTAAGTCTTATAATACTTTTATTCTTTTCTGTCACATGCTTCTATACTGGTATTTTGTTGAAGAGATGCTTAGACAGCTCGCCTGGACTCCATACCTACCCGGACATAGGGCAAGCTGCTTTTGGAATAGCTGGTCGCCTAGGGGTAGCGTGTGCTTGTGTTGAGCTTATGATACTAATGAGCGATAACCTCTCGTCAGTTTTCCCTAACACCCACATGGAAATTGCTGGGATTAATTTAAGCACTAGGCAAGTTTTCACCATCGCATCAGCTCTCTGTGTTCTGCCAACAATTTGCTTACGAAACTTTAAACTCCTTTCGTTTCTTTCAGTTGGAGGTATAGCTGCATCTATATTGGTGACTTCTTGCTTGATATGGGTTGGAGTAATAGACAAAGTTGGATTTCATCCGACTGGAAGTGCTCTAAACCTTGCACACATACCAGTCTCAATTGGTCTCTATAGTTTTTGCTTTGCAGGCCACTCAGTTTTTCCAAACATTTACTCTTCCATGAAAGAACCATCAAAATTTCCAGTTGTTCTAGCAGTCAGCTTTGGCTTTTGTTTTGTTATATACATAGGAGTTGCAGTATTGGGCTATTTAACGTTTGGTGACTTTATCCAATCTCAGTTTACTTTAAACATGCCCAAAGAATTGTATGCTTCAAATATTGCGGCCTGGACAACTGTTGTGAACCCTTTGACAAAGTATGCCCTCACTTTAATGCCAGTTGCACTGAGCATAGAGGAACTCTTACCTCCTGCTGGTCGGCTAAGATGTTACTCTATGTCTATTCTTATCAGAACAGCTTTAGTTTTCTCAAACTTGGTTTTGGCCCTCTCTATTCCTTTTTTCGGTTAG 1410 0.4078 MDEDGLGADREDGFQTDDEENLGFRVFEHSSSDETDSDNAKPNFSNENDDDDDVGVPIPLWPQSYRQSMDMLTSVTPPSMSLLRQISESNRSVTRHRNNDDDSDLKTALIPETILVTQDDQPPTSNNGSRISILSNPAKYSSCDHLPPALEQSSLAQSILNGANVLCGIGLLTTPYALKEGGWLSLIILLFFSVTCFYTGILLKRCLDSSPGLHTYPDIGQAAFGIAGRLGVACACVELMILMSDNLSSVFPNTHMEIAGINLSTRQVFTIASALCVLPTICLRNFKLLSFLSVGGIAASILVTSCLIWVGVIDKVGFHPTGSALNLAHIPVSIGLYSFCFAGHSVFPNIYSSMKEPSKFPVVLAVSFGFCFVIYIGVAVLGYLTFGDFIQSQFTLNMPKELYASNIAAWTTVVNPLTKYALTLMPVALSIEELLPPAGRLRCYSMSILIRTALVFSNLVLALSIPFFG 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01578 469 MobiDBLite consensus disorder prediction 8 36 - -
Accr6g01578 469 Pfam Transmembrane amino acid transporter protein 152 469 IPR013057 -
Accr6g01578 469 PANTHER OS05G0424000 PROTEIN-RELATED 161 469 - -
Accr6g01578 469 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01578 Accr-Chr6 48755504 48759144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01578 1 469 Amino Acid or Auxin Permease AAAP Family AT5G02180 48.671 1.31e-151 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01578 K15015 - qsa:O6P43_016746 531.561