Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01548 ATGTCAAGAGCAGGGTCATCAAGATGGAGTCCAACCCCAGAACAACTTATGATTTTGGAGCAACTGTATAGAAGTGGGATTAGAACTCCAAGTGCTTCACAAATCCAACACATAACAACTCATCTTTGTTTTTATGGTAGGATTGAAGGAAAGAATGTGTTTTATTGGTTTCAGAATCATAAGGCTAGAGATAGACAGAAGCTCAGGAGGAAACTGACCAAGCAGCTTCAACTACAACAACAGCAATATCAGATGCTTGCTCATGATCAATGCCAAGTGATTAATCATCAGGATAATAAGACTCATCATCATCACTGGTCTTTTGGTGGCTTTGATTCTTCTCCTGGTTCTTCATCAGCCCAACAAGTTTCTTTTTATAACCCACCTATCTTGCTTTCTCAGGGAGAGCCATCATCAGAAACATGGAAGACAGCGCAGAGGCAACAAAGTGAGGAGATGATGGATAAAACAAAGACGATGACGTCATCATCACTTTATTACAACAACAATGGTATGATGAGTAGTTGTTGTTGTTGGAGTAGTGTTGAGGATGTTAATGAAGAATCCTCGTATTGTAACACAAGCCGACCTCTCAAGACTCTTGACCTCTTTCCAACTACATCCTCCAAACTCAAAGAAGGCCCCTTTAACCCTACACCCTGA 663 0.4087 MSRAGSSRWSPTPEQLMILEQLYRSGIRTPSASQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRKLTKQLQLQQQQYQMLAHDQCQVINHQDNKTHHHHWSFGGFDSSPGSSSAQQVSFYNPPILLSQGEPSSETWKTAQRQQSEEMMDKTKTMTSSSLYYNNNGMMSSCCCWSSVEDVNEESSYCNTSRPLKTLDLFPTTSSKLKEGPFNPTP 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01548 220 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Accr6g01548 220 FunFam WUSCHEL-related homeobox 4 6 73 - -
Accr6g01548 220 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 211 IPR044555 GO:0003700|GO:0099402
Accr6g01548 220 MobiDBLite consensus disorder prediction 132 158 - -
Accr6g01548 220 SUPERFAMILY Homeodomain-like 4 70 IPR009057 -
Accr6g01548 220 CDD homeodomain 8 67 IPR001356 GO:0003677
Accr6g01548 220 MobiDBLite consensus disorder prediction 132 148 - -
Accr6g01548 220 Gene3D - 1 67 - -
Accr6g01548 220 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Accr6g01548 220 SMART HOX_1 4 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01548 Accr-Chr6 48022702 48023737 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01548 1 74 Wox Gene Family AT2G28610 81.081 8.30e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Accr6g01548 Homeodomain 9.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01548 - - pcin:129289561 236.884