Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01533 ATGAATATTGGTGGGGTGGAACCGCAAGTAGTGGAAGTTGGAGATTTCTTTGAAGAAGAACAAACAGTTATGGCGGCGGTTAAAGAGCGAGAGATCTGGCTTCACAATAACAACAATAATGTTAATATTAATAATAATGGCCATCACCACCAAGATCATCATCATTACGATGAGGATGATGATCTTCTTGCCGGTGTAATGGACGATGCTGCTTCTCTGTTTTACGCCGACGACTTCCCTTGTCTTCCAGATTTCTCATCATGCATGTCGTCTTCTTCGTCTTCGTCTTCACCTCCGGCCGCTGCCAAGGTCAAAAACCCCCTCACGTGCGTCACCTCGTCTTCCAATACTTCGTCGTCTGATTCGGCAGAGACTCCTCTCCTCCCGCCGCCACAGCCGGCGGCAGCGATGGCGTTATCCTCCGCTGCTTCTATGGAGATCTCGCAGCAGACGGATCGACAAGGTGACTGCGCTGACGGCGGAGATTGTGTGTACCAGATGGACACATTTGGGAGTATGGAACTGATGGAGAGCAACGAATTCTTCGATCCTTCATCAATCTTTGAGAATGAAGACAATCTATTGGACGAGTTGACTCAGTTTGACCAGGTGAATAACCAGCCGGAAGTAGAGGGACATGCAAGCGGTGGAATGATGGTATTACAGGAGGAACGGCAACAGCAACCACCGCCACAGTTGGCGGCGGAGGCGGTGGTGACAGATGAAGAGATGAGCTCGGTGTTCTTGGAGTGGCTAAAGATGAACAAAGATAGCGTGTCGGCGAGTGACTTGAGGAGCGTGAGGCTGAAGAAGGCGACAATAGAATGTGCAGCAAAGCGACTTGGTGGAGGAAAAGAAGGGATGAAGCAGTTGCTGAAGCTAATTCTTGAATGGGTTCAAACCAGTCATCTTCAAAAGAAAAGAAGAATGGATTATCACGTTAATAATGATAATAATGACAATCTTTTCATGGCTGATCAGTTTCATCAGGACACTACTAACCCTATTTCTGATTTGAACCACCAATCGTCATTTGGAACGGAATGGATCTCTCAGCGTCCGGCGGCTGCTTCTCTTGCCCCGCCGCCATTTTCGCAATCAGTGGTTGGGTATGGTAATAATAATAACATGGTAGACCCGTTTTCAAGCGAGTTTCAGGCGATGGATTCTACTCATTCTCAGTTCAGTGTTGACAATAACAACCACCCATTCGGGACGACAATGGCGGCATATGGCGGTTACGCGAACAATCAGTATCCATATCAATATTTGCAGGGCGGCGCCGGCTTGGATAGATTGGGTCCGTTGGCGACGAAAGAAGCAAGGAAGAAGAGAATGGCAAGGCAGAGAAGGAATGTATCTCATCATCATCATCAACGGCAACACAATGTGCAAGAACAACAACAAAACCAGCAGAATCAAACTAGGGATTATTGCACCGGGGCTGATACACCTGCCCCACCGCATGCAAATCAACCCAACTGGTTGTATTGGCCTTCGCCACCTGTGGCCGCGTCCAATGGTGTAGGAACCGCTTCTGGTGCGCCAGTGGCTCAGGCGGAGCCGCCACCATCCACGATGACTGGCAGAAATGCGAGGGATCAGAGTACAGCCATGCAGTCCGAACAGAATCATCAGCGAAGCCGAGTCTCATTAGATAAACGACAGGGATGGAAGTCTGAGAAGAACTTGAAGTTTCTTCTGCAGAAGGTGTTAAAGCAAAGCGACGTGGGTAATCTGGGGAGGATAGTGTTGCCAAAGAAAGAAGCAGAAACTCATTTGCCAGAACTGGAGGAAAGAGATGGGATTTCAATAGCAATGGAAGACATTGGGACTTGTCGTGTTTGGAACATGCGCTATAGTATCAGATACTGGCCAAACAACAAAAGCAGGATGTATCTGCTTGAGAATACTGGAGATTTTGTGAGAGCCAATGGACTTCAGGAAGGAGACTTCATAGTCATATATTCAGATGTCAAATGTGGGAAATATATGATAAGAGGAGTGAAGGTGAGGCAAGCTGTAGGGTCGAAACTTGAGACGAGGAAAGCAGCAAAATCATCCCACAAGGTTAACCTTAATGGATCTGATAATCCATCTTCAGCCAACAAGAATCACAAAAAGCAATAA 2130 0.4742 MNIGGVEPQVVEVGDFFEEEQTVMAAVKEREIWLHNNNNNVNINNNGHHHQDHHHYDEDDDLLAGVMDDAASLFYADDFPCLPDFSSCMSSSSSSSSPPAAAKVKNPLTCVTSSSNTSSSDSAETPLLPPPQPAAAMALSSAASMEISQQTDRQGDCADGGDCVYQMDTFGSMELMESNEFFDPSSIFENEDNLLDELTQFDQVNNQPEVEGHASGGMMVLQEERQQQPPPQLAAEAVVTDEEMSSVFLEWLKMNKDSVSASDLRSVRLKKATIECAAKRLGGGKEGMKQLLKLILEWVQTSHLQKKRRMDYHVNNDNNDNLFMADQFHQDTTNPISDLNHQSSFGTEWISQRPAAASLAPPPFSQSVVGYGNNNNMVDPFSSEFQAMDSTHSQFSVDNNNHPFGTTMAAYGGYANNQYPYQYLQGGAGLDRLGPLATKEARKKRMARQRRNVSHHHHQRQHNVQEQQQNQQNQTRDYCTGADTPAPPHANQPNWLYWPSPPVAASNGVGTASGAPVAQAEPPPSTMTGRNARDQSTAMQSEQNHQRSRVSLDKRQGWKSEKNLKFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEERDGISIAMEDIGTCRVWNMRYSIRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQAVGSKLETRKAAKSSHKVNLNGSDNPSSANKNHKKQ 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01533 709 FunFam B3 domain-containing transcription factor FUS3 564 680 - -
Accr6g01533 709 MobiDBLite consensus disorder prediction 110 159 - -
Accr6g01533 709 Gene3D - 558 677 IPR015300 -
Accr6g01533 709 MobiDBLite consensus disorder prediction 524 546 - -
Accr6g01533 709 MobiDBLite consensus disorder prediction 464 480 - -
Accr6g01533 709 SMART B3_2 568 672 IPR003340 GO:0003677
Accr6g01533 709 SUPERFAMILY DNA-binding pseudobarrel domain 567 664 IPR015300 -
Accr6g01533 709 ProSiteProfiles B3 DNA-binding domain profile. 568 672 IPR003340 GO:0003677
Accr6g01533 709 MobiDBLite consensus disorder prediction 440 555 - -
Accr6g01533 709 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 246 696 IPR044800 GO:0003700
Accr6g01533 709 MobiDBLite consensus disorder prediction 443 458 - -
Accr6g01533 709 MobiDBLite consensus disorder prediction 680 709 - -
Accr6g01533 709 CDD BfiI_C_EcoRII_N_B3 566 669 - -
Accr6g01533 709 MobiDBLite consensus disorder prediction 688 702 - -
Accr6g01533 709 MobiDBLite consensus disorder prediction 110 125 - -
Accr6g01533 709 Pfam B3 DNA binding domain 569 667 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01533 Accr-Chr6 47829347 47832597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01533 19 703 B3 DNA Binding Superfamily AT3G24650 43.919 6.49e-147 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr6g01533 B3 3.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01533 K09287 - gmx:100810343 505.753