Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01532 ATGAATATTGGTGGGGTGGAACCGCAAGTAGTGGAAGTTGGAGATTTCTTTGAAGAAGAACAAACAGTTATGGCGGCGGTTAAAGAGCGAGAGATCTGGCTTCACAATAACAACAATAATGATGATGATCTTCTTGCCGGTGTAATGGACGATGCTGCTTCTCTGTTTTACGCCGACGACTTCCCTTGTCTTCCAGATTTCTCATCATGCATGTCGTCTTCTTCGTCTTCGTCTTCACCTCCGGCCGCTGCCAAGGTCAAAAACCCCCTCACGTGCGTCACCTCGTCTTCCAATACTTCGTCGTCTGATTCGGCAGAGACTCCTCTCCTCCCGCCGCCACAGCCGGCGGCAGCGATGGCGTTATCCTCCGCTGCTTCTATGGAGATCTCGCAGCAGACGGATCGACAAGGTGACTGCGCTGACGGCGGAGATTGTGTGTACCAGATGGACACATTTGGGAGTATGGAACTGATGGAGAGCAACGAATTCTTCGATCCTTCATCAATCTTTGAGAATGAAGACAATCTATTGGACGAGTTGACTCAGTTTGACCAGGTGAATAACCAGCCGGAAGTAGAGGGACATGCAAGCGGTGGAATGATGGTATTACAGGAGGAACGGCAACAGCAACCACCGCCACAGTTGGCGGCGGAGGCGGTGGTGACAGATGAAGAGATGAGCTCGGTGTTCTTGGAGTGGCTAAAGATGAACAAAGATAGCGTGTCGGCGAGTGACTTGAGGAGCGTGAGGCTGAAGAAGGCGACAATAGAATGTGCAGCAAAGCGACTTGGTGGAGGAAAAGAAGGGATGAAGCAGTTGCTGAAGCTAATTCTTGAATGGGTTCAAACCAGTCATCTTCAAAAGAAAAGAAGAATGGATTATCACGTTAATAATGATAATAATGACAATCTTTTCATGGCTGATCAGTTTCATCAGGACACTACTAACCCTATTTCTGATTTGAACCACCAATCGTCATTTGGAACGGAATGGATCTCTCAGCGTCCGGCGGCTGCTTCTCTTGCCCCGCCGCCATTTTCGCAATCAGTGGTTGGGTATGGTAATAATAATAACATGGTAGACCCGTTTTCAAGCGAGTTTCAGGCGATGGATTCTACTCATTCTCAGTTCAGTGTTGACAATAACAACCACCCATTCGGGACGACAATGGCGGCATATGGCGGTTACGCGAACAATCAGTATCCATATCAATATTTGCAGGGCGGCGCCGGCTTGGATAGATTGGGTCCGTTGGCGACGAAAGAAGCAAGGAAGAAGAGAATGGCAAGGCAGAGAAGGAATGTATCTCATCATCATCATCAACGGCAACACAATGTGCAAGAACAACAACAAAACCAGCAGAATCAAACTAGGGATTATTGCACCGGGGCTGATACACCTGCCCCACCGCATGCAAATCAACCCAACTGGTTGTATTGGCCTTCGCCACCTGTGGCCGCGTCCAATGGTGTAGGAACCGCTTCTGGTGCGCCAGTGGCTCAGGCGGAGCCGCCACCATCCACGATGACTGGCAGAAATGCGAGGGATCAGAGTACAGCCATGCAGTCCGAACAGAATCATCAGCGAAGCCGAGTCTCATTAGATAAACGACAGGGATGGAAGTCTGAGAAGAACTTGAAGTTTCTTCTGCAGAAGGTGTTAAAGCAAAGCGACGTGGGTAATCTGGGGAGGATAGTGTTGCCAAAGAAAGAAGCAGAAACTCATTTGCCAGAACTGGAGGAAAGAGATGGGATTTCAATAGCAATGGAAGACATTGGGACTTGTCGTGTTTGGAACATGCGCTATAGTATCAGATACTGGCCAAACAACAAAAGCAGGATGTATCTGCTTGAGAATACTGGAGATTTTGTGAGAGCCAATGGACTTCAGGAAGGAGACTTCATAGTCATATATTCAGATGTCAAATGTGGGAAATATATGATAAGAGGAGTGAAGGTGAGGCAAGCTGTAGGGTCGAAACTTGAGACGAGGAAAGCAGCAAAATCATCCCACAAGGTTAACCTTAATGGATCTGATAATCCATCTTCAGCCAACAAGAATCACAAAAAGCAATAA 2076 0.4778 MNIGGVEPQVVEVGDFFEEEQTVMAAVKEREIWLHNNNNNDDDLLAGVMDDAASLFYADDFPCLPDFSSCMSSSSSSSSPPAAAKVKNPLTCVTSSSNTSSSDSAETPLLPPPQPAAAMALSSAASMEISQQTDRQGDCADGGDCVYQMDTFGSMELMESNEFFDPSSIFENEDNLLDELTQFDQVNNQPEVEGHASGGMMVLQEERQQQPPPQLAAEAVVTDEEMSSVFLEWLKMNKDSVSASDLRSVRLKKATIECAAKRLGGGKEGMKQLLKLILEWVQTSHLQKKRRMDYHVNNDNNDNLFMADQFHQDTTNPISDLNHQSSFGTEWISQRPAAASLAPPPFSQSVVGYGNNNNMVDPFSSEFQAMDSTHSQFSVDNNNHPFGTTMAAYGGYANNQYPYQYLQGGAGLDRLGPLATKEARKKRMARQRRNVSHHHHQRQHNVQEQQQNQQNQTRDYCTGADTPAPPHANQPNWLYWPSPPVAASNGVGTASGAPVAQAEPPPSTMTGRNARDQSTAMQSEQNHQRSRVSLDKRQGWKSEKNLKFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEERDGISIAMEDIGTCRVWNMRYSIRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQAVGSKLETRKAAKSSHKVNLNGSDNPSSANKNHKKQ 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01532 691 MobiDBLite consensus disorder prediction 425 440 - -
Accr6g01532 691 CDD BfiI_C_EcoRII_N_B3 548 651 - -
Accr6g01532 691 MobiDBLite consensus disorder prediction 670 684 - -
Accr6g01532 691 MobiDBLite consensus disorder prediction 92 107 - -
Accr6g01532 691 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 228 678 IPR044800 GO:0003700
Accr6g01532 691 Pfam B3 DNA binding domain 551 649 IPR003340 GO:0003677
Accr6g01532 691 Gene3D - 540 659 IPR015300 -
Accr6g01532 691 ProSiteProfiles B3 DNA-binding domain profile. 550 654 IPR003340 GO:0003677
Accr6g01532 691 MobiDBLite consensus disorder prediction 92 141 - -
Accr6g01532 691 SUPERFAMILY DNA-binding pseudobarrel domain 549 646 IPR015300 -
Accr6g01532 691 SMART B3_2 550 654 IPR003340 GO:0003677
Accr6g01532 691 MobiDBLite consensus disorder prediction 506 528 - -
Accr6g01532 691 MobiDBLite consensus disorder prediction 446 462 - -
Accr6g01532 691 MobiDBLite consensus disorder prediction 662 691 - -
Accr6g01532 691 FunFam B3 domain-containing transcription factor FUS3 546 662 - -
Accr6g01532 691 MobiDBLite consensus disorder prediction 422 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01532 Accr-Chr6 47829347 47832597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01532 19 685 B3 DNA Binding Superfamily AT3G24650 44.384 1.88e-146 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr6g01532 B3 3e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01532 K09287 - gmx:100810343 514.998