Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01531 ATGAATATTGGTGGGGTGGAACCGCAAGTAGTGGAAGTTGGAGATTTCTTTGAAGAAGAACAAACAGTTATGGCGGCGGTTAAAGAGCGAGAGATCTGGCTTCACAATAACAACAATAATGATGATGATCTTCTTGCCGGTGTAATGGACGATGCTGCTTCTCTGTTTTACGCCGACGACTTCCCTTGTCTTCCAGATTTCTCATCATGCATGTCGTCTTCTTCGTCTTCGTCTTCACCTCCGGCCGCTGCCAAGGTCAAAAACCCCCTCACGTGCGTCACCTCGTCTTCCAATACTTCGTCGTCTGATTCGGCAGAGACTCCTCTCCTCCCGCCGCCACAGCCGGCGGCAGCGATGGCGTTATCCTCCGCTGCTTCTATGGAGATCTCGCAGCAGACGGATCGACAAGGTGACTGCGCTGACGGCGGAGATTGTGTGTACCAGATGGACACATTTGGGAGTATGGAACTGATGGAGAGCAACGAATTCTTCGATCCTTCATCAATCTTTGAGAATGAAGACAATCTATTGGACGAGTTGACTCAGTTTGACCAGGTGAATAACCAGCCGGAAGTAGAGGGACATGCAAGCGGTGGAATGATGGTATTACAGGAGGAACGGCAACAGCAACCACCGCCACAGTTGGCGGCGGAGGCGGTGGTGACAGATGAAGAGATGAGCTCGGTGTTCTTGGAGTGGCTAAAGATGAACAAAGATAGCGTGTCGGCGAGTGACTTGAGGAGCGTGAGGCTGAAGAAGGCGACAATAGAATGTGCAGCAAAGCGACTTGGTGGAGGAAAAGAAGGGATGAAGCAGTTGCTGAAGCTAATTCTTGAATGGGTTCAAACCAGTCATCTTCAAAAGAAAAGAAGAATGGATTATCACGTTAATAATGATAATAATGACAATCTTTTCATGGCTGATCAGTTTCATCAGGACACTACTAACCCTATTTCTGATTTGAACCACCAATCGTCATTTGGAACGGAATGGATCTCTCAGCGTCCGGCGGCTGCTTCTCTTGCCCCGCCGCCATTTTCGCAATCAGTGGTTGGGTATGGTAATAATAATAACATGGTAGACCCGTTTTCAAGCGAGTTTCAGGCGATGGATTCTACTCATTCTCAGTTCAGTGTTGACAATAACAACCACCCATTCGGGACGACAATGGCGGCATATGGCGGTTACGCGAACAATCAGTATCCATATCAATATTTGCAGGGCGGCGCCGGCTTGGATAGATTGGGTCCGTTGGCGACGAAAGAAGCAAGGAAGAAGAGAATGGCAAGGCAGAGAAGGAATGTATCTCATCATCATCATCAACGGCAACACAATGTGCAAGAACAACAACAAAACCAGCAGAATCAAACTAGGGATTATTGCACCGGGGCTGATACACCTGCCCCACCGCATGCAAATCAACCCAACTGGTTGTATTGGCCTTCGCCACCTGTGGCCGCGTCCAATGGTGTAGGAACCGCTTCTGGTGCGCCAGTGGCTCAGGCGGAGCCGCCACCATCCACGATGACTGGCAGAAATGCGAGGGATCAGAGTACAGCCATGCAGTCCGAACAGAATCATCAGCGAAGCCGAGTCTCATTAGATAAACGACAGGGATGGAAGTCTGAGAAGAACTTGAAGTTTCTTCTGCAGAAGGTGTTAAAGCAAAGCGACGTGGGTAATCTGGGGAGGATAGTGTTGCCAAAGAAAGAAGCAGAAACTCATTTGCCAGAACTGGAGGAAAGAGATGGGATTTCAATAGCAATGGAAGACATTGGGACTTGTCGTGTTTGGAACATGCGCTATAGATACTGGCCAAACAACAAAAGCAGGATGTATCTGCTTGAGAATACTGGAGATTTTGTGAGAGCCAATGGACTTCAGGAAGGAGACTTCATAGTCATATATTCAGATGTCAAATGTGGGAAATATATGATAAGAGGAGTGAAGGTGAGGCAAGCTGTAGGGTCGAAACTTGAGACGAGGAAAGCAGCAAAATCATCCCACAAGGTTAACCTTAATGGATCTGATAATCCATCTTCAGCCAACAAGAATCACAAAAAGCAATAA 2070 0.4783 MNIGGVEPQVVEVGDFFEEEQTVMAAVKEREIWLHNNNNNDDDLLAGVMDDAASLFYADDFPCLPDFSSCMSSSSSSSSPPAAAKVKNPLTCVTSSSNTSSSDSAETPLLPPPQPAAAMALSSAASMEISQQTDRQGDCADGGDCVYQMDTFGSMELMESNEFFDPSSIFENEDNLLDELTQFDQVNNQPEVEGHASGGMMVLQEERQQQPPPQLAAEAVVTDEEMSSVFLEWLKMNKDSVSASDLRSVRLKKATIECAAKRLGGGKEGMKQLLKLILEWVQTSHLQKKRRMDYHVNNDNNDNLFMADQFHQDTTNPISDLNHQSSFGTEWISQRPAAASLAPPPFSQSVVGYGNNNNMVDPFSSEFQAMDSTHSQFSVDNNNHPFGTTMAAYGGYANNQYPYQYLQGGAGLDRLGPLATKEARKKRMARQRRNVSHHHHQRQHNVQEQQQNQQNQTRDYCTGADTPAPPHANQPNWLYWPSPPVAASNGVGTASGAPVAQAEPPPSTMTGRNARDQSTAMQSEQNHQRSRVSLDKRQGWKSEKNLKFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEERDGISIAMEDIGTCRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQAVGSKLETRKAAKSSHKVNLNGSDNPSSANKNHKKQ 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01531 689 MobiDBLite consensus disorder prediction 425 440 - -
Accr6g01531 689 CDD BfiI_C_EcoRII_N_B3 548 649 - -
Accr6g01531 689 SMART B3_2 550 652 IPR003340 GO:0003677
Accr6g01531 689 Pfam B3 DNA binding domain 551 647 IPR003340 GO:0003677
Accr6g01531 689 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 228 676 IPR044800 GO:0003700
Accr6g01531 689 MobiDBLite consensus disorder prediction 660 689 - -
Accr6g01531 689 FunFam B3 domain-containing transcription factor FUS3 546 660 - -
Accr6g01531 689 ProSiteProfiles B3 DNA-binding domain profile. 550 652 IPR003340 GO:0003677
Accr6g01531 689 SUPERFAMILY DNA-binding pseudobarrel domain 549 644 IPR015300 -
Accr6g01531 689 MobiDBLite consensus disorder prediction 92 107 - -
Accr6g01531 689 Gene3D - 540 657 IPR015300 -
Accr6g01531 689 MobiDBLite consensus disorder prediction 92 141 - -
Accr6g01531 689 MobiDBLite consensus disorder prediction 506 528 - -
Accr6g01531 689 MobiDBLite consensus disorder prediction 446 462 - -
Accr6g01531 689 MobiDBLite consensus disorder prediction 668 682 - -
Accr6g01531 689 MobiDBLite consensus disorder prediction 422 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01531 Accr-Chr6 47829347 47832597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01531 19 683 B3 DNA Binding Superfamily AT3G24650 44.505 3.22e-148 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr6g01531 B3 2.1e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01531 K09287 - gmx:100795226 518.464