Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01524 ATGGCCTTGATCCAACAAGAAGAGACTGAAGAGAAAGTCGTGAATCCCTCTGAATCTGCGAAAACTGCAAAATCGTCAGCCTCCTCCAATGTCGATGACCATAAAGAAGCTTCTGATGGCTTTGAAACCGCCAGCGACACCGAGCTCGGCAGCGATGCAGAGGATACGCATAAAGAACGGGAACAACAACATCAACATCAGGAGCTGAGTAATCCTCCGGGGACTGATTCTTCCGAAGAGGCATCACACGATGAGGAATTAAAACAGCAGAAAGCATTGGCTCAAGCAAACGATGCAAAATTAGAAGGGAATAAGCTATTTGGGGATGGGCAATTTGAGGAGGCATTGTCAAAGTATGAACTCGCTTTACAAATTGCTCCAGATATGCCTTCATCTATCGAAGTACGCTCAATATGCCATTCAAATCGTGGTGTATGCTTTATGAAATTGGGGAAATATGAGGACACAATCAAAGAGTGCACTAAGGCATTGGAACTCAATCCTGCCTATCTGAAATCTCTGGTGAGAAGAGGCGAGGCACATGAAAAGCTTGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAAGATATTAGAAATTGATCCCTCAAATGATCAAGCTAGGAGAACCATTCGGAGATTGGAGCCCCTGGCAGCAGAAAAGCGGGAGAAGATGAAGGAAGAAATGATTGGAAAACTGAAAGAAATGGGCAATTCTTTGTTGGGCCGTTTCGGGATGAGCGTTGACAACTTCCAAGCTGTTAAAGATCCGAACACTGGTTCCTATTCCATCTCATTCCAACGCTAA 807 0.4436 MALIQQEETEEKVVNPSESAKTAKSSASSNVDDHKEASDGFETASDTELGSDAEDTHKEREQQHQHQELSNPPGTDSSEEASHDEELKQQKALAQANDAKLEGNKLFGDGQFEEALSKYELALQIAPDMPSSIEVRSICHSNRGVCFMKLGKYEDTIKECTKALELNPAYLKSLVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARRTIRRLEPLAAEKREKMKEEMIGKLKEMGNSLLGRFGMSVDNFQAVKDPNTGSYSISFQR 268
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01524 268 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 1 268 - -
Accr6g01524 268 Pfam Tetratricopeptide repeat 174 204 IPR013105 -
Accr6g01524 268 ProSiteProfiles TPR repeat profile. 171 204 IPR019734 GO:0005515
Accr6g01524 268 Gene3D Tetratricopeptide repeat domain 57 235 IPR011990 GO:0005515
Accr6g01524 268 MobiDBLite consensus disorder prediction 1 91 - -
Accr6g01524 268 Pfam Tetratricopeptide repeat 139 169 IPR001440 GO:0005515
Accr6g01524 268 SUPERFAMILY TPR-like 96 214 IPR011990 GO:0005515
Accr6g01524 268 SMART tpr_5 96 129 IPR019734 GO:0005515
Accr6g01524 268 SMART tpr_5 137 170 IPR019734 GO:0005515
Accr6g01524 268 SMART tpr_5 171 204 IPR019734 GO:0005515
Accr6g01524 268 MobiDBLite consensus disorder prediction 50 66 - -
Accr6g01524 268 ProSiteProfiles TPR repeat profile. 96 129 IPR019734 GO:0005515
Accr6g01524 268 ProSiteProfiles TPR repeat profile. 137 170 IPR019734 GO:0005515
Accr6g01524 268 MobiDBLite consensus disorder prediction 28 42 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr6g01524 Accr-Chr6 47725102 47728513 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01524 66 227 Calmodulin-binding Proteins AT3G25230 32.961 3.76e-14 70.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01524 K24926 - qsa:O6P43_022248 376.326