Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr6g01524 | ATGGCCTTGATCCAACAAGAAGAGACTGAAGAGAAAGTCGTGAATCCCTCTGAATCTGCGAAAACTGCAAAATCGTCAGCCTCCTCCAATGTCGATGACCATAAAGAAGCTTCTGATGGCTTTGAAACCGCCAGCGACACCGAGCTCGGCAGCGATGCAGAGGATACGCATAAAGAACGGGAACAACAACATCAACATCAGGAGCTGAGTAATCCTCCGGGGACTGATTCTTCCGAAGAGGCATCACACGATGAGGAATTAAAACAGCAGAAAGCATTGGCTCAAGCAAACGATGCAAAATTAGAAGGGAATAAGCTATTTGGGGATGGGCAATTTGAGGAGGCATTGTCAAAGTATGAACTCGCTTTACAAATTGCTCCAGATATGCCTTCATCTATCGAAGTACGCTCAATATGCCATTCAAATCGTGGTGTATGCTTTATGAAATTGGGGAAATATGAGGACACAATCAAAGAGTGCACTAAGGCATTGGAACTCAATCCTGCCTATCTGAAATCTCTGGTGAGAAGAGGCGAGGCACATGAAAAGCTTGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAAGATATTAGAAATTGATCCCTCAAATGATCAAGCTAGGAGAACCATTCGGAGATTGGAGCCCCTGGCAGCAGAAAAGCGGGAGAAGATGAAGGAAGAAATGATTGGAAAACTGAAAGAAATGGGCAATTCTTTGTTGGGCCGTTTCGGGATGAGCGTTGACAACTTCCAAGCTGTTAAAGATCCGAACACTGGTTCCTATTCCATCTCATTCCAACGCTAA | 807 | 0.4436 | MALIQQEETEEKVVNPSESAKTAKSSASSNVDDHKEASDGFETASDTELGSDAEDTHKEREQQHQHQELSNPPGTDSSEEASHDEELKQQKALAQANDAKLEGNKLFGDGQFEEALSKYELALQIAPDMPSSIEVRSICHSNRGVCFMKLGKYEDTIKECTKALELNPAYLKSLVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARRTIRRLEPLAAEKREKMKEEMIGKLKEMGNSLLGRFGMSVDNFQAVKDPNTGSYSISFQR | 268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr6g01524 | 268 | PANTHER | TETRATRICOPEPTIDE REPEAT PROTEIN 1 | 1 | 268 | - | - | |
Accr6g01524 | 268 | Pfam | Tetratricopeptide repeat | 174 | 204 | IPR013105 | - | |
Accr6g01524 | 268 | ProSiteProfiles | TPR repeat profile. | 171 | 204 | IPR019734 | GO:0005515 | |
Accr6g01524 | 268 | Gene3D | Tetratricopeptide repeat domain | 57 | 235 | IPR011990 | GO:0005515 | |
Accr6g01524 | 268 | MobiDBLite | consensus disorder prediction | 1 | 91 | - | - | |
Accr6g01524 | 268 | Pfam | Tetratricopeptide repeat | 139 | 169 | IPR001440 | GO:0005515 | |
Accr6g01524 | 268 | SUPERFAMILY | TPR-like | 96 | 214 | IPR011990 | GO:0005515 | |
Accr6g01524 | 268 | SMART | tpr_5 | 96 | 129 | IPR019734 | GO:0005515 | |
Accr6g01524 | 268 | SMART | tpr_5 | 137 | 170 | IPR019734 | GO:0005515 | |
Accr6g01524 | 268 | SMART | tpr_5 | 171 | 204 | IPR019734 | GO:0005515 | |
Accr6g01524 | 268 | MobiDBLite | consensus disorder prediction | 50 | 66 | - | - | |
Accr6g01524 | 268 | ProSiteProfiles | TPR repeat profile. | 96 | 129 | IPR019734 | GO:0005515 | |
Accr6g01524 | 268 | ProSiteProfiles | TPR repeat profile. | 137 | 170 | IPR019734 | GO:0005515 | |
Accr6g01524 | 268 | MobiDBLite | consensus disorder prediction | 28 | 42 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr6g01524 | Accr-Chr6 | 47725102 | 47728513 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr6g01524 | 66 | 227 | Calmodulin-binding Proteins | AT3G25230 | 32.961 | 3.76e-14 | 70.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr6g01524 | K24926 | - | qsa:O6P43_022248 | 376.326 |