Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01523 ATGGCCTTGATCCAACAAGAAGAGACTGAAGAGAAAGTCGTGAATCCCTCTGAATCTGCGAAAACTGCAAAATCGTCAGCCTCCTCCAATGTCGATGACCATAAAGAAGCTTCTGATGGCTTTGAAACCGCCAGCGACACCGAGCTCGGCAGCGATGCAGAGGATACGCATAAAGAACGGGAACAACAACATCAACATCAGGAGCTGAGTAATCCTCCGGGGACTGATTCTTCCGAAGAGGCATCACACGATGAGGAATTAAAACAGAAAGCATTGGCTCAAGCAAACGATGCAAAATTAGAAGGGAATAAGCTATTTGGGGATGGGCAATTTGAGGAGGCATTGTCAAAGTATGAACTCGCTTTACAAATTGCTCCAGATATGCCTTCATCTATCGAAGTACGCTCAATATGCCATTCAAATCGTGGTGTATGCTTTATGAAATTGGGGAAATATGAGGACACAATCAAAGAGTGCACTAAGGCATTGGAACTCAATCCTGCCTATCTGAAATCTCTGGTGAGAAGAGGCGAGGCACATGAAAAGCTTGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAAGATATTAGAAATTGATCCCTCAAATGATCAAGCTAGGAGAACCATTCGGAGATTGGAGCCCCTGGCAGCAGAAAAGCGGGAGAAGATGAAGGAAGAAATGATTGGAAAACTGAAAGAAATGGGCAATTCTTTGTTGGGCCGTTTCGGGATGAGCGTTGACAACTTCCAAGCTGTTAAAGATCCGAACACTGGTTCCTATTCCATCTCATTCCAACGCTAA 804 0.4428 MALIQQEETEEKVVNPSESAKTAKSSASSNVDDHKEASDGFETASDTELGSDAEDTHKEREQQHQHQELSNPPGTDSSEEASHDEELKQKALAQANDAKLEGNKLFGDGQFEEALSKYELALQIAPDMPSSIEVRSICHSNRGVCFMKLGKYEDTIKECTKALELNPAYLKSLVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARRTIRRLEPLAAEKREKMKEEMIGKLKEMGNSLLGRFGMSVDNFQAVKDPNTGSYSISFQR 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01523 267 ProSiteProfiles TPR repeat profile. 95 128 IPR019734 GO:0005515
Accr6g01523 267 SMART tpr_5 136 169 IPR019734 GO:0005515
Accr6g01523 267 SMART tpr_5 95 128 IPR019734 GO:0005515
Accr6g01523 267 SMART tpr_5 170 203 IPR019734 GO:0005515
Accr6g01523 267 Pfam Tetratricopeptide repeat 173 203 IPR013105 -
Accr6g01523 267 MobiDBLite consensus disorder prediction 1 86 - -
Accr6g01523 267 ProSiteProfiles TPR repeat profile. 136 169 IPR019734 GO:0005515
Accr6g01523 267 Gene3D Tetratricopeptide repeat domain 55 234 IPR011990 GO:0005515
Accr6g01523 267 ProSiteProfiles TPR repeat profile. 170 203 IPR019734 GO:0005515
Accr6g01523 267 MobiDBLite consensus disorder prediction 50 66 - -
Accr6g01523 267 Pfam Tetratricopeptide repeat 138 168 IPR001440 GO:0005515
Accr6g01523 267 MobiDBLite consensus disorder prediction 28 42 - -
Accr6g01523 267 SUPERFAMILY TPR-like 94 213 IPR011990 GO:0005515
Accr6g01523 267 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 1 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01523 Accr-Chr6 47725102 47728513 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01523 95 226 Calmodulin-binding Proteins AT3G25230 36.429 6.16e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01523 K24926 - qsa:O6P43_022248 380.948