Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01504 ATGCGAAAACAAGAAGGCCAAAATAGTAGAATGAAAGAGATTCTTGTTGTTGCTCTTATTTTGTTGCATACTTGTTCCCAAGTTGCTACTTCTGGTTCACATGTTGAGTACCTTCCTGGTATTGAAGGTCCTCTACCTTTCCATCTTGAAACTGGGTATGTGGGAGTAGGAGACTCAGCAGCAGAAGAAGGAGCAGGAGAAGTGTTCTATTACTTTATTGAGTCAGAGAACAATCCACAAGAGGCCCCTCTTATGCTTTGGCTCACTGGTGGCCCCGGTTGCTCTTCATTTTCAGGCCTCGTTTTTGAAATAGGTCCAATCAAAGCCAAAATTGAGAAATACAATGGTAGCCTCCCAAAGATGGTTTTCAGGCCACAAGCGTGGACAAAGGCATGCAGTATAATATTTGTAGATTTGCCTCTTGGCACTGGCTTCTCTTATGCAAAGCCCCCTTATCTTCATCGAGGAGATTGGAGTTTAATTAAACATGCCCATCAATTTATTAGAAAGTGGCTAAATGATCACCCGAGATTTCTGTCAAATCAAATCTATATCGGTGGTGACTCATATTCTGGCACTCCTGTTCCTGTAATTGTTCAAGAAATTTCAAATGGAAATGAAGCAGGAGTCCAACCATGGATAAATCTCCGGGGATATGTGCTAGGGAATCCCGTTACAACAATGGAAGAAGAAAGTTATTTACCCTCATTTGCTCATGGAATGGCACTCATTTCCAATGAAATTTATATGTCCTTGCAGAAAAATTGTAAAGGGAATTATATAAATATAGATCCAGAAAATAAATTATGTCTGAGAGAACTCGAAACTTTACACGAGCTCATGTCTGGACTTGACATACATATCACTTTGAAATCTAAATGTGGGTTGGCTTCACCGAGGCCTCACGGATTTTGGAGTCCGAGATCTCTCATCAACAAATTTCGGAGGCATCTTAGTTCTGACCTTCCAATGCCACCTATAAGCTGCAGAAGCTATGCATATTTCTTGGCCTATGATTGGATTCGGGATGACAGAGTTCAGGAAGCACTGCATATTCGAAAGGGTACCATAAGGAATTGGGTAGGTTGTAAATCCGATGAGTATGATTTCGACATCATCAATTCCGTTCCATATCATACGAATCTAAGTCAAAAAGGCTATCGTTCTTTGATTTACAATGGAGATCATGACCCATTAGTTCCATTTATGTCAACTCAAGCATGGATTAGAGATTTAAACTACTCCATTGTCGAAGACTGGAGACCTTGGCTTGCCAATGGCCAGGTTGCAGGATATACGAGAAAGTATTCTAATCAGATGACATTCGCCACTGTAAAGGGTGCAGGGCATGTAGCTCCTGAGAACAAACCTAACGAATGTTTTGAGATGTTCATTCGGTGGATATCGAATAAGCCTTTGTAG 1422 0.4093 MRKQEGQNSRMKEILVVALILLHTCSQVATSGSHVEYLPGIEGPLPFHLETGYVGVGDSAAEEGAGEVFYYFIESENNPQEAPLMLWLTGGPGCSSFSGLVFEIGPIKAKIEKYNGSLPKMVFRPQAWTKACSIIFVDLPLGTGFSYAKPPYLHRGDWSLIKHAHQFIRKWLNDHPRFLSNQIYIGGDSYSGTPVPVIVQEISNGNEAGVQPWINLRGYVLGNPVTTMEEESYLPSFAHGMALISNEIYMSLQKNCKGNYINIDPENKLCLRELETLHELMSGLDIHITLKSKCGLASPRPHGFWSPRSLINKFRRHLSSDLPMPPISCRSYAYFLAYDWIRDDRVQEALHIRKGTIRNWVGCKSDEYDFDIINSVPYHTNLSQKGYRSLIYNGDHDPLVPFMSTQAWIRDLNYSIVEDWRPWLANGQVAGYTRKYSNQMTFATVKGAGHVAPENKPNECFEMFIRWISNKPL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01504 473 SUPERFAMILY alpha/beta-Hydrolases 35 472 IPR029058 -
Accr6g01504 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 457 IPR001563 GO:0004185|GO:0006508
Accr6g01504 473 Pfam Serine carboxypeptidase 39 470 IPR001563 GO:0004185|GO:0006508
Accr6g01504 473 Gene3D alpha/beta hydrolase 41 473 IPR029058 -
Accr6g01504 473 FunFam Serine carboxypeptidase-like 19 28 300 - -
Accr6g01504 473 FunFam Carboxypeptidase 375 470 - -
Accr6g01504 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185|GO:0006508
Accr6g01504 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Accr6g01504 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Accr6g01504 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Accr6g01504 473 FunFam Carboxypeptidase 328 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01504 Accr-Chr6 46944079 46949552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01504 29 63 Calmodulin-binding Proteins AT2G22960 60.000 7.15e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01504 K16296 - tpra:123922058 589.341