Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01503 ATGCAAAGACAAGAAGGCCAAAAGAGTAGAATGGAGATTCTTGTTGTTGCTCTTATTTTGTTGCAGACTTGTTCCCAAGTTGCAACTGCTGGTACACATGTTGAGTACCTTCCTGGTTTTGAAGGTCCTCTTCCTTTTCATCTTGAAACTGGGTATGTGGGAGTTGGAGACTCAGCAGCAGAAGGAGGAGCAGGAGAAGTGTTCTATTACTTTATTGAGTCAGAGAACAATCCAAAAGAGGACCCTCTTATGCTTTGGCTCACTGGGGGCCCCGGTTGCTCATCATTCACAGGCCTCGTCTTTGAAATAGGTCCAATCGCATTCAAAGTTGAGAAATACAATGGTAGCCTCCCAAATTTGGTTTTGAGGCCACAAGCGTGGACAAAGGCATGCAGTATAATATTTGTAGATTTGCCTCTCAACAGTGGCTTCTCTTATGCAAATACCCCTCATCTTCAACGAAATGATTGGATTTTAATTAAACATGCACATCAATTTCTTAGAAAGTGGCTAATTGATCACCCAAAATTTCGAACAAATCAAGTTTATATTGGTGGTGACTCATATTCTGGTCTTCCGATTCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGAAGAAGGAATCCAGCCATGGATAAATCTCCAGGGATATGTGCTAGGGAATCCCGACACAACTTTGGAAGAAGAAAATTATTTACCCACATTTGCTCATGGAATGGCACTTATTTCCGATGAGCTTTATATGTCCTTGCAGCAAAATTGTAAAGGAAATTATATAAAAATAGATCCCGAAAATAAATTATGTCTGAGAGACCTCAACTCATTACATAAGCTCATGTCAGGACTTAATTTATTTCACATTTTGGAACCTAAATGTGAGTTAGCTTCGCCTAGGCCACATGGATTTTGGAGTAGAAGATCTCTCATCAACAAATTTCGAAGGCCTCTTAGTTCTCGCCTTGCAAGGCCACCTATGAATTGCAAGAGTTATGTATATTTCTTCAGCTACGATTGGCTTGCGGATGACAAAGTTCAGGAGGCATTAAATATTCGAAAGGGTACCATAAGGAATTGGCAACGTTGTAACAACTTTAACTATAATTTTACCATCAGCAGTGCCTTTCCATATCACGTAAATCTAAGCCAAAAAGGCTATCGATCTTTGATTTACAGTGGAGATCATGACCCAGCAGTTCCATTTTTGTCAACTCAAGCATGGATCAGAGATTTAAACTACTCCATTGTTGACGACTGGAGACCTTGGCTTGCCAATGGCCAGGTTGCAGGATATACGAGAAGGTATTCTAATCAGATGACATTCGCCACTGTAAAGGGTGCAGGACACATGGCTCCTGAGTACAAACCTGAAGAATGTTTTGAGATGTTCATTCGGTGGATATCTAAGAAGCCTTTGTAA 1419 0.4031 MQRQEGQKSRMEILVVALILLQTCSQVATAGTHVEYLPGFEGPLPFHLETGYVGVGDSAAEGGAGEVFYYFIESENNPKEDPLMLWLTGGPGCSSFTGLVFEIGPIAFKVEKYNGSLPNLVLRPQAWTKACSIIFVDLPLNSGFSYANTPHLQRNDWILIKHAHQFLRKWLIDHPKFRTNQVYIGGDSYSGLPIPAIVQEISNGNEEGIQPWINLQGYVLGNPDTTLEEENYLPTFAHGMALISDELYMSLQQNCKGNYIKIDPENKLCLRDLNSLHKLMSGLNLFHILEPKCELASPRPHGFWSRRSLINKFRRPLSSRLARPPMNCKSYVYFFSYDWLADDKVQEALNIRKGTIRNWQRCNNFNYNFTISSAFPYHVNLSQKGYRSLIYSGDHDPAVPFLSTQAWIRDLNYSIVDDWRPWLANGQVAGYTRRYSNQMTFATVKGAGHMAPEYKPEECFEMFIRWISKKPL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01503 472 Pfam Serine carboxypeptidase 38 468 IPR001563 GO:0004185|GO:0006508
Accr6g01503 472 FunFam Carboxypeptidase 374 469 - -
Accr6g01503 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 456 IPR001563 GO:0004185|GO:0006508
Accr6g01503 472 FunFam Carboxypeptidase 327 471 - -
Accr6g01503 472 FunFam Serine carboxypeptidase-like 11 28 472 - -
Accr6g01503 472 SUPERFAMILY alpha/beta-Hydrolases 34 471 IPR029058 -
Accr6g01503 472 Gene3D - 328 472 - -
Accr6g01503 472 Gene3D alpha/beta hydrolase 28 300 IPR029058 -
Accr6g01503 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Accr6g01503 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Accr6g01503 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Accr6g01503 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01503 Accr-Chr6 46904596 46910453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01503 28 56 Calmodulin-binding Proteins AT2G22960 65.517 6.49e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01503 K16296 - gmx:100792006 605.905