Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01502 ATGTTGAGCACCTTATCTACAAATACCAAAATGCAAAGACAAGAAGGCCAAAAGAGTAGAATGGAGATTCTTGTTGTTGCTCTTATTTTGTTGCAGACTTGTTCCCAAGTTGCAACTGCTGGTACACATGTTGAGTACCTTCCTGGTTTTGAAGGTCCTCTTCCTTTTCATCTTGAAACTGGGTATGTGGGAGTTGGAGACTCAGCAGCAGAAGGAGGAGCAGGAGAAGTGTTCTATTACTTTATTGAGTCAGAGAACAATCCAAAAGAGGACCCTCTTATGCTTTGGCTCACTGGGGGCCCCGGTTGCTCATCATTCACAGGCCTCGTCTTTGAAATAGGTCCAATCGCATTCAAAGTTGAGAAATACAATGGTAGCCTCCCAAATTTGGTTTTGAGGCCACAAGCGTGGACAAAGGCATGCAGTATAATATTTGTAGATTTGCCTCTCAACAGTGGCTTCTCTTATGCAAATACCCCTCATCTTCAACGAAATGATTGGATTTTAATTAAACATGCACATCAATTTCTTAGAAAGTGGCTAATTGATCACCCAAAATTTCGAACAAATCAAGTTTATATTGGTGGTGACTCATATTCTGGTCTTCCGATTCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGAAGAAGGAATCCAGCCATGGATAAATCTCCAGGGATATGTGCTAGGGAATCCCGACACAACTTTGGAAGAAGAAAATTATTTACCCACATTTGCTCATGGAATGGCACTTATTTCCGATGAGCTTTATATGTCCTTGCAGCAAAATTGTAAAGGAAATTATATAAAAATAGATCCCGAAAATAAATTATGTCTGAGAGACCTCAACTCATTACATAAGCTCATGTCAGGACTTAATTTATTTCACATTTTGGAACCTAAATGTGAGTTAGCTTCGCCTAGGCCACATGGATTTTGGAGTAGAAGATCTCTCATCAACAAATTTCGAAGGCCTCTTAGTTCTCGCCTTGCAAGGCCACCTATGAATTGCAAGAGTTATGTATATTTCTTCAGCTACGATTGGCTTGCGGATGACAAAGTTCAGGAGGCATTAAATATTCGAAAGGGTACCATAAGGAATTGGCAACGTTGTAACAACTTTAACTATAATTTTACCATCAGCAGTGCCTTTCCATATCACGTAAATCTAAGCCAAAAAGGCTATCGATCTTTGATTTACAGTGGAGATCATGACCCAGCAGTTCCATTTTTGTCAACTCAAGCATGGATCAGAGATTTAAACTACTCCATTGTTGACGACTGGAGACCTTGGCTTGCCAATGGCCAGGTTGCAGGATATACGAGAAGGTATTCTAATCAGATGACATTCGCCACTGTAAAGGGTGCAGGACACATGGCTCCTGAGTACAAACCTGAAGAATGTTTTGAGATGTTCATTCGGTGGATATCTAAGAAGCCTTTGTAA 1449 0.4017 MLSTLSTNTKMQRQEGQKSRMEILVVALILLQTCSQVATAGTHVEYLPGFEGPLPFHLETGYVGVGDSAAEGGAGEVFYYFIESENNPKEDPLMLWLTGGPGCSSFTGLVFEIGPIAFKVEKYNGSLPNLVLRPQAWTKACSIIFVDLPLNSGFSYANTPHLQRNDWILIKHAHQFLRKWLIDHPKFRTNQVYIGGDSYSGLPIPAIVQEISNGNEEGIQPWINLQGYVLGNPDTTLEEENYLPTFAHGMALISDELYMSLQQNCKGNYIKIDPENKLCLRDLNSLHKLMSGLNLFHILEPKCELASPRPHGFWSRRSLINKFRRPLSSRLARPPMNCKSYVYFFSYDWLADDKVQEALNIRKGTIRNWQRCNNFNYNFTISSAFPYHVNLSQKGYRSLIYSGDHDPAVPFLSTQAWIRDLNYSIVDDWRPWLANGQVAGYTRRYSNQMTFATVKGAGHMAPEYKPEECFEMFIRWISKKPL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01502 482 FunFam Carboxypeptidase 337 481 - -
Accr6g01502 482 SUPERFAMILY alpha/beta-Hydrolases 44 481 IPR029058 -
Accr6g01502 482 Gene3D - 338 482 - -
Accr6g01502 482 Pfam Serine carboxypeptidase 48 478 IPR001563 GO:0004185|GO:0006508
Accr6g01502 482 FunFam Carboxypeptidase 384 479 - -
Accr6g01502 482 Gene3D alpha/beta hydrolase 38 310 IPR029058 -
Accr6g01502 482 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 466 IPR001563 GO:0004185|GO:0006508
Accr6g01502 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 145 IPR001563 GO:0004185|GO:0006508
Accr6g01502 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 156 IPR001563 GO:0004185|GO:0006508
Accr6g01502 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Accr6g01502 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Accr6g01502 482 FunFam Serine carboxypeptidase-like 11 38 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01502 Accr-Chr6 46904596 46910483 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01502 38 66 Calmodulin-binding Proteins AT2G22960 65.517 6.30e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01502 K16296 - gmx:100792006 605.905