Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01498 ATGGAGATTCCCGCTGCTGTTGCTGCAAAAATAGTAGAGCTTACAGTGGAACCCATTGTCAGGCAGGTGGGATATATATTTTGCTATAGAAACAATTTGAAGAAGCTAGAGGATCTAGCAAATGAGCTTCAGGCAACAAAAGAACGTATTGATCATAAAGTTGAGGCTGAAAGAAGAAATCTAAGAAAGATCGAAGATGATGTGCTAAAATGGCAAGAAAGTGTTATCAAGACTTTAGAAGACGCAAAGCAACTTTGGAAGGATCCACATGATGCAAAAGTATGGTGTTTTCCAAATTTGAAGTCCCAATATCAACATGGTAGAAAGGCAAAGAAAATGGCAGACACCATTGTTGAAATGAAGGGAAAGGGGAGGTTTGATGAAGGAGTTGGATATGTTCCACGTTTAGATATAACAAACAACTTGCCTGCTATAAGAGGAAGTGATGGGCTTGAGTCAAGAAAATCAATCAAGGAGGACGTTTTGTTGTCTCTAAAGGACCCTAAGGTCAATAAAATTGGGGTTTATGGGATAGGTGGAGTGGGAAAGACCACTCTAGTTCAAGAAGTTTGCAAACAAGTTAAGCATGACAAGTTGTTTGATGAAGTGCTTATGGTGACTATATCCGACACAAATCTTGAAAGAATTCAAGATGAGATTGCTGAACAATTAGGCCTTCGTTTAGAAGAAAGGACCTCAAAGAGTGGAAGATCTAACCACCTGTGTGAGAGGATAAAAATGGAGAAAACCCTCATTATACTAGATGATTTACGCGAGAAAATTGATTTGGATAAGTTAGGAATCCCTTCTTTAGATTTATGGGAGAAAATGAATCCAGAAAAGGTGGGAGTTCCTCTAAAGGATGATTACAAGGGTTGCAAATTATTAATGACTTCAAGAAGTGAAGATATTTTACAAAAGAATGATGCTCAAAAGAACTTCCCCCTTCAAGTTTTGAATGATGAAGAATCTTGGAGTTTGTTTGAAGCTATGGTTGGTGATGTTAAGGATGATAATTTACGAGAAATAGCTACCCAAGTGGCTCAAAGGTGTGCTGGCTTGCCTGTTTTGATAGTCACAATTGCAAAGTCATTAAAATATAATGAGGATATCGATTATTGGAAAGATACCTTGCAAAATCTAAAAAGGGTTGATAGCAAAGACATGAAGGAAACCATTTTTTCAGCTTTGGAGTTCAATTTCAGTCGGTTGGAAGATGAAGTAAAGAAAGTATTCTTGCTTTGTGGTGTGCATGGAACATTCATAGTTGTTAGTGACTTGTTGAAGTATGCTATTGGTTTGGGTATATTCAAATGTATAAATACCATTGAGCATGCAAGGAATAGACTTCGTAAAATAATTATTGACCTCAAGGCATCTTGTTTGTTGGTTGATGATGCAAGAGCGGGAATTATCAAAATGCATGACATCGTTCATGAAGTAGCCATTTCAATGGCCTCAAAATATGCTTTCACAAAAATTAATGCTAAGTTGCAAGATTGGCCAGGAAAGGATATTCCTGAGAGGTGTACACATATTATCTTGTATCATTGTTGCATCCAAAACCTTCCTAAAAGGCTAGATTGTCCCCATCTAACATTTCTCCACATAAACAGCTCCGATAATCGCTCATTAGAAATTCCAAATTCCTTTTTTGAAGGGGTGGGAAACCTTGAAGCATTAGATTTAACAGGCATGACAATAGCTTCATTACCTATATCTTTAAGCTCCTTGACCAAACTCAAAACATTGTGTTTGGATTATTGCTCTTTAAAAGATATGACTGGAATAGGTGCATTGATGAACTTAGAAATTCTTAGCTTAATTCATTCATCCGTGGAAGAGTTTCCAAGAGACATAAAACAGTTGACCAAGCTTAGAATGTTGGATTTGAGCAGGTCTGGAATTGGGACCACCCTACCCAACATATTGTGTAAGTTGACCAAAATAGAGGAATTGTATATGGGCAACGCCGCAATTAAATGGGACATGGAAAGTTCATCTACTCAAAAGAGAAATGCTAGTCTTGCTAAGCTTGGTGATTTGATTGGCTTGACCACTCTAGAAATTCAAATCCGTGAGGCTTCGCTTTTACCCAAGGACATAGCATTTGAGAAGTTAGAAAGATATAAAGTTGTTATCGGAGATAAATGGGAATGGTCAGACAACAAAGAGACCTCAAGGTTGCTAAAGGTGAAGTTGGATAGCAGCATTTGTTGGGAACAAGGGATCAAAACATTGATTAAAAGAGTGGAAGATTTATACTTGGATAAAATAATTGGCATTTCGAATGTGCTTTTTGATTTGAATGGCGAAGGATTTCCCTTGCTTAGGCATTTGCACATCCAAAATAATGGAGAAATTCAGCATATTGTCGACCCAATTAAGAGGAATCAAACTCATGTTTTGTTCCCAAAATTGGAGACAATGGTACTCCACAATCTCAATAACTTGATGAAGATATGTCATAGCTCTGTTAGGGATAATTCTTTTGGCAAGCTCAAGGTTGTTAGAGTAAGAAATTGTGACCAATTGGTATATCTCTTCTCTATTTCTATGGTCAAAGCTTTTTCTCAACATGTTGAGATTGAAGTTTCTGAATGTAGTTCTATGAAGATGATTATCTTTGTAGATAGTACAAATAGTGGCAAAATTTTTGATGAGAAGATTGAGTTTCTTCCATTGCGCTCGTTGACTTTGCAACATTTGCCAACCATTGACTATTTTTGCCCTCATGAGTGGACGTCTTCTCTAGAAACTATGGAGAACTTGTCGAGGGTTAATATTTCAACACCGTTTTTTAATGCCAAGGTTAAATTTTCTAATTTGGAAACTCTGAAGTTGAGTTCGGTTAATGTGAAAAAAATTTGGGATGAGTCTTCAGCATCTTATTTGGTCCATAATTTGGCCAACTTGACTGTAGAGGATTGTAGTGGCTTGAAGTATTTATTCCCGTCCTCTATGGTTGGAAGGCTTTCAAATCTCAAGCAACTTGAAATAAGTAAATGTGATCTGATGGAGGAGATAATTGCTACAGAGGAGATAAATGGCGTGGCAGATGGAGAGGTGCTTTTTCCTAAATTGGAAGCAATAATCATAAAAGACATGCAAAACTTAAAGACTATATGGCATCTCATCCTGGCTTCAAATTCCTTGGCCTTCCTTAAGACACTCAAAGTAAAAAATTGTGAAAAAATTGAGAAAATATTTCCAGAATATATGAATGGAGCATTTGCAACTCTAGAGACTTTGGAGGTTGAAGACTGTAAGACAGTGCAACAGATATTCCAATTAGGTGACAGTGCAGATGATAAACCACAGCTCAAGTATATCACACTACTTCGATTGCCACAACTGAAACAAGTTTGGAGCAGAGATCCTCAATCAGGTCATTGCTTCAAGAGTCTGCAAGTTGTACGTGTTGAGCACTGTGGACATTTAGAGTACCTTTTTCCTTTCACCATAGCTGAGCACCTACCTCAACTTGAAGCAATTACAATAAAGAATGCTGGAAAGATGAAGGAAATTGTTTCCAAAAGAGAAGAACCATTACATAACATTGTCAATTTTGTGTTTGATGAACTAACCTCAATAGTGCTTTGGCATTTACATGATTTGCAGGGATTTTATGCTGGAAATCATAGTTTATCTTGTTCATCCTTAAAAGAATTAAATGTCTGGAAATGTGAGAAATTAAAGCTATTCAAGACACAAAGTATGAGTAGCCAAGGAACACATTATGATGATAATCTCTCAGTCTCAATGCAGCAATCACTTTTCACATTAGAAGAGGATAAGAAAAAGCATATTGGAAGATCCTACGATGGAGAATTAAACTTGGAAGCTAAAAGAAGATCTAATGGTGGAATTTTGTTGGGCTTTTGGAATTTTAGTTGGCTCAAGTTGGTACCCAAAATCTCTTCCTCCCCATATTATTTAACCTAG 3945 0.3691 MEIPAAVAAKIVELTVEPIVRQVGYIFCYRNNLKKLEDLANELQATKERIDHKVEAERRNLRKIEDDVLKWQESVIKTLEDAKQLWKDPHDAKVWCFPNLKSQYQHGRKAKKMADTIVEMKGKGRFDEGVGYVPRLDITNNLPAIRGSDGLESRKSIKEDVLLSLKDPKVNKIGVYGIGGVGKTTLVQEVCKQVKHDKLFDEVLMVTISDTNLERIQDEIAEQLGLRLEERTSKSGRSNHLCERIKMEKTLIILDDLREKIDLDKLGIPSLDLWEKMNPEKVGVPLKDDYKGCKLLMTSRSEDILQKNDAQKNFPLQVLNDEESWSLFEAMVGDVKDDNLREIATQVAQRCAGLPVLIVTIAKSLKYNEDIDYWKDTLQNLKRVDSKDMKETIFSALEFNFSRLEDEVKKVFLLCGVHGTFIVVSDLLKYAIGLGIFKCINTIEHARNRLRKIIIDLKASCLLVDDARAGIIKMHDIVHEVAISMASKYAFTKINAKLQDWPGKDIPERCTHIILYHCCIQNLPKRLDCPHLTFLHINSSDNRSLEIPNSFFEGVGNLEALDLTGMTIASLPISLSSLTKLKTLCLDYCSLKDMTGIGALMNLEILSLIHSSVEEFPRDIKQLTKLRMLDLSRSGIGTTLPNILCKLTKIEELYMGNAAIKWDMESSSTQKRNASLAKLGDLIGLTTLEIQIREASLLPKDIAFEKLERYKVVIGDKWEWSDNKETSRLLKVKLDSSICWEQGIKTLIKRVEDLYLDKIIGISNVLFDLNGEGFPLLRHLHIQNNGEIQHIVDPIKRNQTHVLFPKLETMVLHNLNNLMKICHSSVRDNSFGKLKVVRVRNCDQLVYLFSISMVKAFSQHVEIEVSECSSMKMIIFVDSTNSGKIFDEKIEFLPLRSLTLQHLPTIDYFCPHEWTSSLETMENLSRVNISTPFFNAKVKFSNLETLKLSSVNVKKIWDESSASYLVHNLANLTVEDCSGLKYLFPSSMVGRLSNLKQLEISKCDLMEEIIATEEINGVADGEVLFPKLEAIIIKDMQNLKTIWHLILASNSLAFLKTLKVKNCEKIEKIFPEYMNGAFATLETLEVEDCKTVQQIFQLGDSADDKPQLKYITLLRLPQLKQVWSRDPQSGHCFKSLQVVRVEHCGHLEYLFPFTIAEHLPQLEAITIKNAGKMKEIVSKREEPLHNIVNFVFDELTSIVLWHLHDLQGFYAGNHSLSCSSLKELNVWKCEKLKLFKTQSMSSQGTHYDDNLSVSMQQSLFTLEEDKKKHIGRSYDGELNLEAKRRSNGGILLGFWNFSWLKLVPKISSSPYYLT 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01498 1314 Pfam NB-ARC domain 272 401 IPR002182 GO:0043531
Accr6g01498 1314 Pfam NB-ARC domain 162 269 IPR002182 GO:0043531
Accr6g01498 1314 Coils Coil 26 74 - -
Accr6g01498 1314 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1081 1236 - -
Accr6g01498 1314 Gene3D Ribonuclease Inhibitor 885 1257 IPR032675 -
Accr6g01498 1314 Gene3D Ribonuclease Inhibitor 597 881 IPR032675 -
Accr6g01498 1314 Gene3D - 136 314 IPR027417 -
Accr6g01498 1314 Gene3D - 318 405 IPR042197 -
Accr6g01498 1314 SUPERFAMILY L domain-like 473 914 - -
Accr6g01498 1314 SUPERFAMILY L domain-like 863 1238 - -
Accr6g01498 1314 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 415 IPR027417 -
Accr6g01498 1314 Gene3D Ribonuclease Inhibitor 485 596 IPR032675 -
Accr6g01498 1314 PRINTS Disease resistance protein signature 172 187 - -
Accr6g01498 1314 PRINTS Disease resistance protein signature 351 365 - -
Accr6g01498 1314 PRINTS Disease resistance protein signature 244 258 - -
Accr6g01498 1314 PRINTS Disease resistance protein signature 990 1006 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01498 Accr-Chr6 46757344 46762697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01498 173 457 WRKY Transcription Factor Family AT5G45050 23.301 6.20e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01498 - - pcin:129322205 1615.51