Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01485 ATGATTTGCTTCGCATGTTTTTCTTCACACCCAGAAAAAGCGTCAAAGAAATCCCACCACGGAAAGAATACAGGGTCCTCTCCGTATACAACTTCTGTCCCATTAGAAGCCCCTTCGCTGCGACACCATGGAACTCATAACCCTTATCCAAAGCCCATCACTTCACAGCCGACAAAAGCTGAAACAAATAAGTATGCCAGCACCGAAAACATTGGCAGCAATAACATTGCTTCACAGAACTTCACCTTCTGGGATTTAGCGGTGGCGACAAGGAACTTCCGACAAGAAACCCTAATTGGTGAAGGTGGATTCGGGAGAGTTTATAAAGGGAGACTTGAAAAAACTAACCAGGATGTAGCTGTGAAGCAACTTGACAGGAATGGATTTCAAGGGAATAGAGAGTTCCTAGTTGAAGTGTTGATGTTGAGCCTCTTGCATCATGAGAATCTAGTGAATCTTGTTGGTTATTGTGCTGATGGAGATCAGAGACTTTTAGTATACGAGTACTTGCCATTTGGATCTGTAGAGGATCATCTTCTTGATTTGTCTCCTAATCAAAAGCCTCTAGATTGGAATACAAGGATGAAAATAGCATTTGGAGCAGCAAAAGGATTAGAATATTTGCATGATAAGGCCAAGCCACCTGTGATCTATAGGGACTTGAAAGCAGCAAACATCTTGCTAGACAAAGACTTCAATGCAAAACTTTCAGATTTCGGACTAGCCAAGCTTGGACCTATGGGGGACAAGTCTCATGTTTCTTCTAGAGTCATGGGAACTTATGGATACTGTGCTCCTGAATATCAACGAACAGGTCAGCTCACTATAAAATCAGATGTATATAGTTTTGGAGTTGTCTTGCTCGAATTGATCACAGGAAAAAGAGTTATTGACACCACAAGATCCACGCGGGAACAGAACCTTGTTGTTTGGGCACAATCAATATTCAAGGACCCTCATAGACATCAAGAACTAGCAGATCCCCTTCTAAAAGGAAACTTCTCTTTAAAAGCACTGAAGCAAGCAGTGGCTATGGCAGCCATGTGCGTGAACGAGGAAGCTACTGCGCGGCCATTAATGAGCGACGTAGTGAGTGCCCTTAGCTTCCTTGGGACAGACAACGATAACTCTCAAGGCGAAGGAGGAGGTCATGATGATAATGTTGAAGATGATGAAACATACTTTGAAAGCCAACATAGTGCCGCTAATAAACAAGCCAACACTACTGTTCTATGGGATCTTTTAATATAA 1251 0.4261 MICFACFSSHPEKASKKSHHGKNTGSSPYTTSVPLEAPSLRHHGTHNPYPKPITSQPTKAETNKYASTENIGSNNIASQNFTFWDLAVATRNFRQETLIGEGGFGRVYKGRLEKTNQDVAVKQLDRNGFQGNREFLVEVLMLSLLHHENLVNLVGYCADGDQRLLVYEYLPFGSVEDHLLDLSPNQKPLDWNTRMKIAFGAAKGLEYLHDKAKPPVIYRDLKAANILLDKDFNAKLSDFGLAKLGPMGDKSHVSSRVMGTYGYCAPEYQRTGQLTIKSDVYSFGVVLLELITGKRVIDTTRSTREQNLVVWAQSIFKDPHRHQELADPLLKGNFSLKALKQAVAMAAMCVNEEATARPLMSDVVSALSFLGTDNDNSQGEGGGHDDNVEDDETYFESQHSAANKQANTTVLWDLLI 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01485 416 MobiDBLite consensus disorder prediction 49 63 - -
Accr6g01485 416 SUPERFAMILY Protein kinase-like (PK-like) 80 373 IPR011009 -
Accr6g01485 416 FunFam probable serine/threonine-protein kinase RLCKVII 65 169 - -
Accr6g01485 416 FunFam Serine/threonine-protein kinase PBS1 170 382 - -
Accr6g01485 416 MobiDBLite consensus disorder prediction 12 63 - -
Accr6g01485 416 CDD STKc_IRAK 99 367 - -
Accr6g01485 416 SMART serkin_6 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g01485 416 Pfam Protein kinase domain 94 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g01485 416 Gene3D Transferase(Phosphotransferase) domain 1 171 390 - -
Accr6g01485 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Accr6g01485 416 Gene3D Phosphorylase Kinase; domain 1 53 169 - -
Accr6g01485 416 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Accr6g01485 416 PANTHER OS07G0668900 PROTEIN 3 376 - -
Accr6g01485 416 MobiDBLite consensus disorder prediction 373 401 - -
Accr6g01485 416 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01485 Accr-Chr6 45942729 45945847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01485 1 405 Glycoside Hydrolase AT3G07070 64.477 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Accr6g01485 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01485 - - zju:107426628 540.806