Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01484 ATGATTTATGACATAGCTGTTTCATCAATATTCTTACATCTTCTTTTGTTTGTGTCTTTCCAGTACTCTTCTTCATCTTCATCATCATCAACATTTACCAGTGGCTCCTCCCTCTCGGTGGAGAAACCAGAAGATGTTCTTGTCTCACCAAATGGAGCCTTCGCAGCTGGCTTCTATGTGATCGGTGAAAACGCTTATGTTTTCGCCATCTGGTTCACCCAACCACCTCAATCTTCCCCAAGCTCGAATAATGTAGTTTGGATTGCCAATCGTGACCAACCTGTCAACGGAAAACGGTCATCACTTTCCCTCCTCAGAACAGGAACCCTTATCCTCTCCGACGCCGGGAAGAGGAACATATGGTCAAGCGAAACAACCTCCTCTTGGCCGACCCGACTGACTCTCAACGACAATGGAAACCTAGTACTCTTTGAGTTCCATTCACAAGACACAAAAAATATTCTATGGCAGAGCTTTGATTTTCCAACAGACACTCTCCTTCCTGGCCAACAACTCAAGAATGACACACAACTTGTCGCTTCGAGAAGTGACACCAACCATTCCTCTGGTTTCTACAAGCTCTTCTTCGACGACAGCAATGTTCTTCGCCTTCTCTATCACAGGCTTGATGTGTCCGATGCTTATTGGCCAGCGCCATGGATGTTGAGCTTTGAAGCTGGAAGGAGCACCCACAACATTAACAGAGTCGCGGTGTTAGATTCTCTTGGAAAATTCCTTTCAACAGATAACTACAATTTCACAACTTCTGATTATGATACATCGACACAACGAAGATTGAAAATCGATCCTGATGGCAACCTTCGAGTGTACAGCTTAAAGCAGAATGATAGTATTAATCAATGGTACGTGTCATGGCAAGCTATACCTGATTCTTGTCATGTTCATGGAATATGTGGAGTAAATAGTTTTTGCCAGTACGATGCTAGCAAGGGAGGAAAATATTGCTCGTGTCTTCCAGGATATAGAGCGAAGAACCATAGTGATTGGTCTTATGGGTGTGAACCCAAATTTGAGTTCACATGTGATCAAAATTTCTTGAAGTTGCCCAATGTTGAGTTCTATGGAAATGACTATATCTATAAGCTAAACATCAGCTACAAGAATTGCAAGGATTTGTGTGTATATGACTGTGAGTGCAAGGCTTTTCAGTACACATTCGGAGAAGATGTGGGCCGATTTAGGTGCTATATCAAAAGAATCCTGGCCAATGGTCACAATTCACCAAGCTTTCGTGGAACAACCTACTTGAGACTACCAAAATCCAATCAAGATTCATTTTTCCTTGAAGAAGAAGAATCTGCTCATGATATTGGTGATATTTGTTTCGTGAAGCTTGAAGGAGACTCAAGAAATGGAATCAGTTTTGTTAAGTTCCTTCTTTGGTTTTCTGTTGCTGTTGGGGTTGTTGAAGTCCTCTTCATTTCTATAATTTGGTGTTCTTTGATTAGACCCAAAAAGAATTCTGATGCGACTCAACAAGTCTACAATTTTCTTTCCCCTTTCCGGTTCAGGAAATTTACTTACTCCGAGCTAAAACAAGCGACCAAAGGGTTCAAAGAAGAAATCGGTAGAGGAGCAAGCGGAATAGTATATAAAGGAGTATTGTCAGATCAAAGAGTTGTTGCAGTAAAGAAGCTGAATGGTAACAACAATGGAGGCAAACATGAAGAAGGAGAATTCATGGCTGAAATGAGTATAATCGGACGGCTTAACCACATGAACTTGATCGAAATGTGGGGATATTGCGCAGAGGGAAAGCAAAGACTCTTGATGTATGAGTACATGGAGAAAGGTTCTTTGGCGGAAAATCTCAAATCAAACACTTTGGATTGGACCAAAAGATACAACATCGCTCTCGGAACAGCAAGGGTTCTAGCTTACTTACACGAAGAATGTTTGGAATGGATACTACATTGTGACATAAAGCCACAGAATATTCTTCTAGATTCAAATTACCAACCCAAGGTAGCAGATTTCGGCTTATCCAAGCTTCGAAATCGGAATGAACAAAACACTCAAAGCTTTTCCATGATAAGAGGAACGAGGGGATATATGGCGCCAGAGTGGGTTTTCAATCACCCAATAACATCGAAGGTGGATGTGTATAGCTATGGGATGGTTGTATTGGAAATGATAACAGGAAGGAGTCCAATGACGATGAAAATTCATAGTGATTATGATGATGATGATGATCAAGAGGGTCACAATGTGAGGCTTGTGACATGGGTGAGAGAGAAGAAGAACAACACGACGTCGTCGTCGTGGAGGTCTTGGGTGGAGCAAATAATTGATCCTGGCATGGGATCAGAGTGTGAGGCTGGTGAGATGCAAAAGATAGAAACTTTGGCAAGTGTGGCTTTAAAGTGCGTGGAAGAAGACAAAAATCGGAGGCCCACTATGAGCCAAGTTGTAGAAGTGCTTCTGAGCCATGAAGATTATGCTTCTTCCTAG 2472 0.4195 MIYDIAVSSIFLHLLLFVSFQYSSSSSSSSTFTSGSSLSVEKPEDVLVSPNGAFAAGFYVIGENAYVFAIWFTQPPQSSPSSNNVVWIANRDQPVNGKRSSLSLLRTGTLILSDAGKRNIWSSETTSSWPTRLTLNDNGNLVLFEFHSQDTKNILWQSFDFPTDTLLPGQQLKNDTQLVASRSDTNHSSGFYKLFFDDSNVLRLLYHRLDVSDAYWPAPWMLSFEAGRSTHNINRVAVLDSLGKFLSTDNYNFTTSDYDTSTQRRLKIDPDGNLRVYSLKQNDSINQWYVSWQAIPDSCHVHGICGVNSFCQYDASKGGKYCSCLPGYRAKNHSDWSYGCEPKFEFTCDQNFLKLPNVEFYGNDYIYKLNISYKNCKDLCVYDCECKAFQYTFGEDVGRFRCYIKRILANGHNSPSFRGTTYLRLPKSNQDSFFLEEEESAHDIGDICFVKLEGDSRNGISFVKFLLWFSVAVGVVEVLFISIIWCSLIRPKKNSDATQQVYNFLSPFRFRKFTYSELKQATKGFKEEIGRGASGIVYKGVLSDQRVVAVKKLNGNNNGGKHEEGEFMAEMSIIGRLNHMNLIEMWGYCAEGKQRLLMYEYMEKGSLAENLKSNTLDWTKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLRNRNEQNTQSFSMIRGTRGYMAPEWVFNHPITSKVDVYSYGMVVLEMITGRSPMTMKIHSDYDDDDDQEGHNVRLVTWVREKKNNTTSSSWRSWVEQIIDPGMGSECEAGEMQKIETLASVALKCVEEDKNRRPTMSQVVEVLLSHEDYASS 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01484 823 ProSiteProfiles EGF-like domain profile. 295 334 IPR000742 -
Accr6g01484 823 Pfam S-locus glycoprotein domain 247 331 IPR000858 GO:0048544
Accr6g01484 823 Gene3D - 23 161 IPR036426 -
Accr6g01484 823 ProSiteProfiles PAN/Apple domain profile. 348 421 IPR003609 -
Accr6g01484 823 Gene3D Phosphorylase Kinase; domain 1 486 601 - -
Accr6g01484 823 PIRSF SRK 2 822 IPR024171 GO:0004674
Accr6g01484 823 Gene3D - 162 287 IPR036426 -
Accr6g01484 823 ProSiteProfiles Protein kinase domain profile. 523 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g01484 823 ProSiteProfiles Bulb-type lectin domain profile. 23 156 IPR001480 -
Accr6g01484 823 CDD B_lectin 47 162 IPR001480 -
Accr6g01484 823 Gene3D Hepatocyte Growth Factor 347 428 - -
Accr6g01484 823 Pfam PAN-like domain 350 405 IPR003609 -
Accr6g01484 823 Gene3D Transferase(Phosphotransferase) domain 1 602 822 - -
Accr6g01484 823 SMART blect_4 38 162 IPR001480 -
Accr6g01484 823 FunFam Putative receptor-like protein kinase 602 822 - -
Accr6g01484 823 Pfam D-mannose binding lectin 85 177 IPR001480 -
Accr6g01484 823 SUPERFAMILY Protein kinase-like (PK-like) 500 814 IPR011009 -
Accr6g01484 823 PANTHER OS07G0415500 PROTEIN 9 816 - -
Accr6g01484 823 FunFam S-receptor-like serine/threonine-protein kinase 491 601 - -
Accr6g01484 823 SMART serkin_6 523 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g01484 823 ProSitePatterns Protein kinases ATP-binding region signature. 529 552 IPR017441 GO:0005524
Accr6g01484 823 CDD PAN_AP_plant 347 426 - -
Accr6g01484 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Accr6g01484 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 179 IPR036426 -
Accr6g01484 823 Pfam Protein kinase domain 526 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g01484 823 CDD STKc_IRAK 529 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01484 Accr-Chr6 45912271 45914742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01484 513 819 Trihelix Transcription Factor Family AT5G38560 40.064 2.73e-62 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr6g01484 Pkinase 1.5e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01484 - - gmx:100783758 912.138