Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01429 ATGGATGTGTCATCTGGCTCCAACATCAACCAGCAATCTGCTTCTAAAATGCTACCTCCCCGTCAACAATCTCGGGCTGGAGGACTGCAAACTTCTCTATCCCTCGTTTCTTCAGATCCTCGTCTCTCTCCTGAGGAACCCAGATCAAACTCTGACAATATTCGAGAATCCCCTACTGAAAGTGCTAGTTCACGAGAAACTTGGCCCACTGCTGAAGCTACTGCAGGAAAGAAGATGGATAATGGGAAGGCTGAGAATGATTTCCCTGAACAGTCAGTCATCCGTCGTGTTTCTAGTGCTGACAAAATCACTCTTCAGGACATAGGAAGAGAACGGGTTGACATGATCTCTGAAAAGATGGACCATCTACCTGAAGAATTTTTAGAACAGCTGAAGAACAGTCTTCGAGTGATCCTTGAGGGAGGGAATGGTTCACAGCACAGGGAGGAATTCTTCAATTTGCAGAAGCTTGTTCAAAGTAGAACTGATTTAACGGCCAAGACCTTGATTAGAGCACATCGTGTGCAACTTGAAATTCTTGTTGCTATTAACACTGGAATTCAGGCATTTTTGCATCCCAACATCAGTCTCTCACAAACTTCCCTTATTGAGATCTTTGTGTACAAGAGATGCAGAAACATAGCCTGTCAAAACCTGCTTCCTGCTGATGACTGTACCTGTGAAATATGCACCAGCAGAAATGGGTTCTGCAATCTCTGCATGTGCGTGATCTGCAACAAGTTCGACTTTGAAGTAAATACGTGCCGCTGGATTGGGTGTGATTTATGCTCTCATTGGACTCATACAGATTGTGCCATTCGTGATCAGCTTATTTGCATGGGCCCTTCTGCAAAGAGTGGCGCAGGACCAAGTGAAATGGTTTTTAGGTGCCATGCATGCAAGAGGACTTCAGAGCTGTTGGGCTGGGTTAAAGATGTTTTTCAGCATTGTGCCCCATCTTGGGATGGGGAGGCTTTAATGAGGGAACTTGATTCTGTTAGTAGGATCTTTCATGGTAGTAAAGACCCCAGAGGGACGAAACTATTCTGGAAGTGTGATGATCTAAAGGAGAAAATGAAGAGTGGAAGAGTGGAGCCAAATGCTGCCTGCAGTGCAATATTGATGTTTTTCCAAGAGCTTGAGGTGGACTCTCCAAAGAGCCTTGAAAATGGAGAAAGCGGAAGGATGATTGCTCCACAGGAGGCATGCAATAGAATTGCTGATGTGGTGCAGGAGGCTATAAGAAAAATGGAATTGGTAGCTGATGAGAAGATGAAAATGTTCAAGAAGGCTCGCTTGGCTCTTGAGGCTTGTGATCGAGACTTGGCAGATAAGGCAAGGGAAGCAGCAGAACTCAAGATGGACAGGCAAAAAAAGAAATTACAGATAGAAGAACTGGAGAGAATTGTAAGGCTGAAAACTGCAGAGGCTGATATGTTCCAGCTTAAGGCTAATGAGGCTAAACGAGAGGCTGAGAGGCTTCAGAGGATTGCTCTTGCCAAATCGGACAAATCAGAGGAAGAATATACTAGCAACTACCTGAAACAACGATTAAGTGAGGCTGAAGCTGAGAAGCAATATCTCTATGAGAAGATCAAATTGCAGGAGGGTTCTCGTTCTTGGCAGAGCAGCGGTGGTGACCCATCTCAGATTCTGATGTATTCCAAAATCCATGATCTGCTCTCCCAAGGCAGATAG 1698 0.4494 MDVSSGSNINQQSASKMLPPRQQSRAGGLQTSLSLVSSDPRLSPEEPRSNSDNIRESPTESASSRETWPTAEATAGKKMDNGKAENDFPEQSVIRRVSSADKITLQDIGRERVDMISEKMDHLPEEFLEQLKNSLRVILEGGNGSQHREEFFNLQKLVQSRTDLTAKTLIRAHRVQLEILVAINTGIQAFLHPNISLSQTSLIEIFVYKRCRNIACQNLLPADDCTCEICTSRNGFCNLCMCVICNKFDFEVNTCRWIGCDLCSHWTHTDCAIRDQLICMGPSAKSGAGPSEMVFRCHACKRTSELLGWVKDVFQHCAPSWDGEALMRELDSVSRIFHGSKDPRGTKLFWKCDDLKEKMKSGRVEPNAACSAILMFFQELEVDSPKSLENGESGRMIAPQEACNRIADVVQEAIRKMELVADEKMKMFKKARLALEACDRDLADKAREAAELKMDRQKKKLQIEELERIVRLKTAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTSNYLKQRLSEAEAEKQYLYEKIKLQEGSRSWQSSGGDPSQILMYSKIHDLLSQGR 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01429 565 SMART PHD_3 241 301 IPR001965 -
Accr6g01429 565 MobiDBLite consensus disorder prediction 1 95 - -
Accr6g01429 565 Pfam PHD - plant homeodomain finger protein 211 334 IPR032881 -
Accr6g01429 565 Coils Coil 435 504 - -
Accr6g01429 565 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 26 563 IPR004082 -
Accr6g01429 565 PIRSF UCP025218 5 564 - -
Accr6g01429 565 Pfam Coiled-coil region of Oberon 429 561 IPR032535 -
Accr6g01429 565 MobiDBLite consensus disorder prediction 54 70 - -
Accr6g01429 565 MobiDBLite consensus disorder prediction 1 39 - -
Accr6g01429 565 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 176 191 IPR004082 -
Accr6g01429 565 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 248 268 IPR004082 -
Accr6g01429 565 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 503 525 IPR004082 -
Accr6g01429 565 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 321 340 IPR004082 -
Accr6g01429 565 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 202 223 IPR004082 -
Accr6g01429 565 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 161 176 IPR004082 -
Accr6g01429 565 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 464 484 IPR004082 -
Accr6g01429 565 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 119 141 IPR004082 -
Accr6g01429 565 CDD PHD_OBE1_like 241 300 IPR047578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01429 Accr-Chr6 44507825 44510015 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01429 211 313 PHD Gene Family AT5G57380 31.731 1.12e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01429 - - gmx:100795450 966.066