Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01402 ATGGAAAACGAATTCTTCCTCAATGCTGCTTCCCTTCACTTCGAACCTTCTTCTTCTTCAATGCCTACGTGGCAGTCGATTTCATCCGCCATGGTCATGGATGTTCAAGTTCAAGCTCCCGTCCTCAATTGCGCTTCCGAGCAGCCCCAAGATTGCTTCTACAACAACGCCAAATGGGATAATAAGTCAACGGATCATCACGGTCTTCAATTCGATTCTGCTCTGAGCTCGATGGTTTCTTCGCCAGCGGCGTCAAATTCTAATGTTATGCCCAACAATGAGAATTTAATGATCAGGGAATTGTTAGGGAAATTGGGAAACCTTGGCGCGTCTTACATTAATGGCGGAAATAGCACTGATACTTCATGTTATAGCACTCCCTTGAGCTCGCCTCCGAAGATGAACATGATGAACCAGATGGTGAAAGAGAACTTGCCCATTTTAGGGAAGTCGATGGTTTTAAATTCTAATGTTGCAGAATTATCATCTGATCCTGGTTTTGCAGAGAGAGCTGCCAAGTTTTCTTGCTTTGGAAGCAGGAGCTTCAATGGCAGAACAAACCAACTAGGCATGAACAACGGTCAATTGTCTCTAAGATCTACTCCATCAATGGAAAATGAGAAGCTCGCTAGGGTTTCAAGTAGTCCTGCTCTGAAAGCACTTGGTGGATCTCAAACGGAAGTGGCGAATTCCCAGGAGGAATCGACAATCTCTGAGCAAGCTCCAAATGGGGAAAATGGTGTGAATGTGAAATCAAGGAAAAGAAAAGCTTCTTCTTCCAAGGGAAACACCAGAGAAACTTCAACATCAACCAATCCTACTCCCAAGGCTATTGAAACTAACGAAGATTCAAATGCTAAGAAGCGCAGCAAGCCAAATGAGAGTGAAGGGAATGAAAATGGAAGTGTGAAGGTAGATGAGGAATCAAAAGGAGGTACTACTAGCAATAATGGAGGAGATGAGAAACAGACCAAGAGTAACTCATCAAAACCTCCTGAACCTCCAAAAGATTACATTCATGTCAGAGCAAGAAGAGGCCAAGCCACTGACAGCCACAGCCTTGCAGAAAGAGTCCGAAGGGAAAAGATCAGTGAGAGGATGAAGTTTCTCCAAGATCTTGTACCAGGTTGCAATAAGGTCACTGGTAAAGCACTTATGCTTGATGAAATCATAAACTATGTGCAGTCATTGCAGCGTCAAGTTGAGTTTTTATCTATGAAACTGGCTTCTGTCAACACCAGGCTGGACTTCAACATTGACAATCTAATCCCAAAAGATATGCTTCAATCAAGTAACACTTTGGCACACCCATTATTCCCTCTAGATTCCTCAGCGCAAGCCTTTTATGGGCAACACACTCAGCAAAACCCAGGAATCCACAATAACATTCTTAATGGTGTTATGTCCCACAGCACAGTAGACCCACTAGAAGCTGCCTCTCTGTGCCAAAACATGAGCATGCAATTACCACCCCTTAATGGCTTTAATGAAGGTGGTTCTCAGTTTCCAGTAGCATTCTGTGAGGATGACCTTCACACCATTGTTCAAATGGGAATTGGCCAAATTGGAGCTGGAAAATCACCCAGTCATTCCCAGAACTTCAACGGTTCAAATCAAGTCACTCATCTGAAAGTTGAACCCTAA 1644 0.4361 MENEFFLNAASLHFEPSSSSMPTWQSISSAMVMDVQVQAPVLNCASEQPQDCFYNNAKWDNKSTDHHGLQFDSALSSMVSSPAASNSNVMPNNENLMIRELLGKLGNLGASYINGGNSTDTSCYSTPLSSPPKMNMMNQMVKENLPILGKSMVLNSNVAELSSDPGFAERAAKFSCFGSRSFNGRTNQLGMNNGQLSLRSTPSMENEKLARVSSSPALKALGGSQTEVANSQEESTISEQAPNGENGVNVKSRKRKASSSKGNTRETSTSTNPTPKAIETNEDSNAKKRSKPNESEGNENGSVKVDEESKGGTTSNNGGDEKQTKSNSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFNIDNLIPKDMLQSSNTLAHPLFPLDSSAQAFYGQHTQQNPGIHNNILNGVMSHSTVDPLEAASLCQNMSMQLPPLNGFNEGGSQFPVAFCEDDLHTIVQMGIGQIGAGKSPSHSQNFNGSNQVTHLKVEP 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01402 547 MobiDBLite consensus disorder prediction 525 547 - -
Accr6g01402 547 MobiDBLite consensus disorder prediction 183 210 - -
Accr6g01402 547 MobiDBLite consensus disorder prediction 183 338 - -
Accr6g01402 547 Gene3D - 344 419 IPR036638 GO:0046983
Accr6g01402 547 MobiDBLite consensus disorder prediction 218 247 - -
Accr6g01402 547 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 347 397 IPR011598 GO:0046983
Accr6g01402 547 Coils Coil 394 414 - -
Accr6g01402 547 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 232 453 IPR024097 GO:0006355
Accr6g01402 547 FunFam Basic helix-loop-helix transcription factor 344 416 - -
Accr6g01402 547 SMART finulus 353 403 IPR011598 GO:0046983
Accr6g01402 547 CDD bHLH_AtBPE_like 337 422 - -
Accr6g01402 547 Pfam Helix-loop-helix DNA-binding domain 351 398 IPR011598 GO:0046983
Accr6g01402 547 MobiDBLite consensus disorder prediction 262 280 - -
Accr6g01402 547 MobiDBLite consensus disorder prediction 281 306 - -
Accr6g01402 547 MobiDBLite consensus disorder prediction 307 331 - -
Accr6g01402 547 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 345 416 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01402 Accr-Chr6 44081645 44084219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01402 1 501 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 47.151 4.51e-114 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr6g01402 HLH 1.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01402 - - gmx:100812081 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g01507 7 41673400 41676084 Accr6g01402 6 44081645 44084219 CCT