Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01375 ATGGCTACCGTAAACAGTGTGGTCTGCTTCTTCTTTTTGGTCAACATTTTCTTAAGCTCTCGACCAACTCAATCTGTACCTGAAGGTGCTCTCATAACAGAGCTTCCTGGATTTAGTGGTACCATTCCTTCCAAGCACTATGCTGGTTATGTGACGGTGGATGAAAGTCATGGGAGGAGCCTGTATTACTACTTTGTTGAATCAGAAAGCAATCCATCTGAGGATCCTGTGGTTTTATGGCTTAATGGTGGACCCGGATGCTCTAGCTTCGACGCTTTCGTATATGAGCATGGTCCTTTCAATTTCGAAAAGGCCAAAACCAAGGGATCCTTGCCCACATTGCACCTCAATCCTTACAGCTGGTCAAAGGTTTCCAACATTATATATTTGGATTCTCCAGCTGGTGTGGGCTTTTCTTTCTCAAAAAATAAATCTGATTACATAACTGGAGACATAAAGACTGCTTTAGATACACACACCTTTCTCCTTAAGTGGTTTGAACTCTATCCTGAGTTCCTTTCTAACCCATTCTTCATCACCGGAGAGTCGTATGCTGGAATTTATGTACCTACTCTAGCTTATGAAGTAATGAAAGGAATTGATGCTGGTACAAAGCCCAACCTCAATTTCAAGGGATATATGGTTGGAAACGGCTGTACAGATGATGAATTTGATGGCAATGCTCTTGTTCCATTTGCACATGGGATGGGTCTTATCTCAGATGAATTGTTTGAGGAGGCTAGAATTGAGTGCAATGGGAATTTCTATAATCCATTGAATGAAAGTTGTGCAACAAAGCTTAAAAAAGTTGATCAGGTGATTGATGGGCTAAACATATATGACATTCTAGAACCTTGCTATCATGGGCCGGAGACAGTGGAGACAGCACCGTCCTATATCCGGTTACCATCCAGTTTCCGGCGCTTAGGTGAGACCGAGAGACCTCTACCTGTGAGAAAGAGGATGTTTGGTCGTGCTTGGCCTCTTAGAGCTCCTGTGAGAGATGGAATTGTGCCAACTTGGCCGCAACTTAGCAATAGCCACAACCTTCCATGCACTGATAATGAGGTCGCAAACTCGTGGTTGAACACTGACATAGTCAGGAAAGCAATTCACACTGCAGAGAAATCTGACGTCAGTATTTGGGGTTTATGCACGGACAATATTTTATACCATCATGATGCTGGGAGCATGATCAAATTCCACAAGAACCTGACAGCCAGAGGATATCGGGCACTTATATACAGTGGTGATCATGATATGTGTGTTCCATTCACTGGAAGTCAAGCATGGACTAGATCAATGGGATACAAAGTTGTTGATGAATGGAGGCCGTGGATAGTCAATAATCAAGTTGCTGGTTATATACAAGGATATGATAAAAATCTCACATTTATGACCATAAAGGGAGCTGGGCACGCTGTTCCAGAATATAAGCCACAAGAGTCGTTGTATTTCTACAAGCGTTTTCTGGATGGATTGCCAATGTAG 1491 0.4279 MATVNSVVCFFFLVNIFLSSRPTQSVPEGALITELPGFSGTIPSKHYAGYVTVDESHGRSLYYYFVESESNPSEDPVVLWLNGGPGCSSFDAFVYEHGPFNFEKAKTKGSLPTLHLNPYSWSKVSNIIYLDSPAGVGFSFSKNKSDYITGDIKTALDTHTFLLKWFELYPEFLSNPFFITGESYAGIYVPTLAYEVMKGIDAGTKPNLNFKGYMVGNGCTDDEFDGNALVPFAHGMGLISDELFEEARIECNGNFYNPLNESCATKLKKVDQVIDGLNIYDILEPCYHGPETVETAPSYIRLPSSFRRLGETERPLPVRKRMFGRAWPLRAPVRDGIVPTWPQLSNSHNLPCTDNEVANSWLNTDIVRKAIHTAEKSDVSIWGLCTDNILYHHDAGSMIKFHKNLTARGYRALIYSGDHDMCVPFTGSQAWTRSMGYKVVDEWRPWIVNNQVAGYIQGYDKNLTFMTIKGAGHAVPEYKPQESLYFYKRFLDGLPM 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01375 496 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Accr6g01375 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 480 IPR001563 GO:0004185|GO:0006508
Accr6g01375 496 SUPERFAMILY alpha/beta-Hydrolases 32 495 IPR029058 -
Accr6g01375 496 FunFam Carboxypeptidase 351 495 - -
Accr6g01375 496 FunFam Carboxypeptidase 25 309 - -
Accr6g01375 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Accr6g01375 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Accr6g01375 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Accr6g01375 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Accr6g01375 496 Gene3D alpha/beta hydrolase 25 314 IPR029058 -
Accr6g01375 496 Gene3D - 349 495 - -
Accr6g01375 496 FunFam Carboxypeptidase 398 493 - -
Accr6g01375 496 Pfam Serine carboxypeptidase 36 493 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01375 Accr-Chr6 43390209 43395574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01375 357 496 Calmodulin-binding Proteins AT2G22960 47.143 3.43e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01375 K16296 - gmx:100792057 824.313