Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01336 ATGGGAGGCATTGGCAAAACAACTGTTGCTAAAGCCATTTACAATACAATTAGTCATAAATTTGGAGCAAGAAGTTTTGTTGCAAATATAAGAGAAAATTCTAAGCATGCTAATGACCAAGTTAATTTGCAAAGGCAACTCATTTCTGATATCACTAAAACACAAGTTTTCAAGATACCTGACATTGATAGAGGAAAAAAAATAATTCAAGAAAGATTTCCCAACATAAAATCTTTTGTTGTATTAGATGATGTGGATAGTGTCAATCAACTGAATGCTTTATGTGGGAGTCTTCAATGGTTTTGTCCAGGAAGTGTAATAGTCATAACAACTAGGGATATGCACCTGCTTAACGTCCTTAAAGCTGATCATAAGTATAGAATGAGAGAAATGAACAAAATTGAGTCTCTTGAGCTTTTAAGTTGGCATGCCTTTAAGCAAGCAGTTCCTTTGAATGAAGACTTTAGAGAACTCTCTAAAAATGTAGTTGCTTACTGTGGTGGACTTCCACTAGCTCTTGAGGTCCTTGGTTCTTGTTTGCATGAGAGGACAATTCAAGAATGGAGTGCTGCATTGTCCAAACTACAAAGGATTCCTAATAAAGATATACACGCAAAGTTAAAAATAAGTTATGATGGATTGAATGATCATATGGAGAAGGATATCTTCCTTGACATCTGTTGCTTCTTCATCAATAAGGACAGGAGCTATGTTACACAGATATTAGATGGTTGTGGACTTCATGCAAAAAATGGACTACAAGTTCTTATAGAGCGGAGCCTCCTAAAAGTTGGTAGAAATAATAAGCTTGAAATGCATGATTTATTACAAGGAATGGGAAAAGAAATCATCCGCGAAAGCCCCCCTAAAGATCCTGAGGAGCGTAGCAGATTATGGTTTCATGAAGAAGTACTTGATGTGCTAATAGAACATACGGGGACCAAAGCTATTGAGGGTATATCTCTAAAGGAGCCTGGAACCCATAGAGAGTGTCTTATTGATTCTAAGGCATTTCAGGAGATGAGAAAACTTCGATTGCTCCAACTAGATTATGTAAACCTTATAGGAGATTATGCGCTTCTTTCCAAAAAGCTGAGGTGGCTTTGTTGGCATGGATTTCCATTGAAATTCACTCCAACCACCTTTTGTCAAGAACAATTAGTTGCTATTGACTTCAAATATAGCAAACTCAAAGTAGTTTGGAAAGAGCCCCAGTTGCTAGAGATGTTGAAGACACTCAATCTTAGTCATTCATCTTACTTGACACAAACTCCTAATTTTACAAAACTGCCAAACCTTGAAAGGCTAGTGATGAAAGATTGTCAGAGCTTGATTTTAATTGCTGAGAGCATTGGAGATCTAAAAAATCTTCTTCATGTGAATCTAAAAGATTGCAAGAGCCTTAGAGAGCTTCCTAGAAGCATCTACAAGTTGAAATCATTAAAAACTCTCATTCTTTCTGGTTGTTTATTGATTGACCATTTAGAAGAAGATTTTGAGCAAATGGAGGGCTTGACAAGTCTTATGGCAGATAATACTGCCATAACACAAGTACCATTTTCATTAGCAAGATTGAGAGGGCTTGTACAACATGGATATGTATCTTTGTGTGGTTATGAAGGAAGAGCACAAGATATATTTCCTTCTCTTGTATCGTCTTGGATGTCACGTAGCAATATTCCTCAATCCCCTATTGAAGAATTTGTTCAAAGCATATCATCTCTAGTTTTGTCACTTGGACAGACTAGTGGCTTTCATGGTATATCTCCATTTCAATTTGCAAGGCCTGCAGGTTCCTTGAATTCTCTTTTACTTCAACTAGGAGTGTGTGACAAAGCAAACTTCCTGAAAGACAGGATTTCGCAGGGATGGAATTATGGTGGATGGGATGATTCTCTCCTACCTGGTGATCAATATCCTGATTGGTTCATATATGAGGGTGAAGGATGCTTAGTAAATTTCAAGGTGCCTCAAGTCATAGGCTGTCAATTGAAAGCAATGCTTCTCAATGTTGTGTATTATTCCTGCATGGATGATACAACAGCGCCTCAATTTCTCATAGATGTCTTGATCATCAACTACACCAAGGCTACTATTATGCAACACAAGGGAGACTGGGTAACCTTTCATGAAGATGCAAAGTGGCAGAGTATTATTCCAAGTCTTCAACCTGGCGATCACGTGGAGCTTGTTTTAAGTATTGGGCCTCACTTTCCTGTGAAGAAGATTGCAGCTTACTTGATTTATGATGGTTCTAAGCGTCGCAGGTTATTGGAATAA 2280 0.3772 MGGIGKTTVAKAIYNTISHKFGARSFVANIRENSKHANDQVNLQRQLISDITKTQVFKIPDIDRGKKIIQERFPNIKSFVVLDDVDSVNQLNALCGSLQWFCPGSVIVITTRDMHLLNVLKADHKYRMREMNKIESLELLSWHAFKQAVPLNEDFRELSKNVVAYCGGLPLALEVLGSCLHERTIQEWSAALSKLQRIPNKDIHAKLKISYDGLNDHMEKDIFLDICCFFINKDRSYVTQILDGCGLHAKNGLQVLIERSLLKVGRNNKLEMHDLLQGMGKEIIRESPPKDPEERSRLWFHEEVLDVLIEHTGTKAIEGISLKEPGTHRECLIDSKAFQEMRKLRLLQLDYVNLIGDYALLSKKLRWLCWHGFPLKFTPTTFCQEQLVAIDFKYSKLKVVWKEPQLLEMLKTLNLSHSSYLTQTPNFTKLPNLERLVMKDCQSLILIAESIGDLKNLLHVNLKDCKSLRELPRSIYKLKSLKTLILSGCLLIDHLEEDFEQMEGLTSLMADNTAITQVPFSLARLRGLVQHGYVSLCGYEGRAQDIFPSLVSSWMSRSNIPQSPIEEFVQSISSLVLSLGQTSGFHGISPFQFARPAGSLNSLLLQLGVCDKANFLKDRISQGWNYGGWDDSLLPGDQYPDWFIYEGEGCLVNFKVPQVIGCQLKAMLLNVVYYSCMDDTTAPQFLIDVLIINYTKATIMQHKGDWVTFHEDAKWQSIIPSLQPGDHVELVLSIGPHFPVKKIAAYLIYDGSKRRRLLE 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01336 759 Gene3D - 1 126 IPR027417 -
Accr6g01336 759 Gene3D - 130 215 IPR042197 -
Accr6g01336 759 PRINTS Disease resistance protein signature 166 180 - -
Accr6g01336 759 PRINTS Disease resistance protein signature 72 86 - -
Accr6g01336 759 PRINTS Disease resistance protein signature 405 421 - -
Accr6g01336 759 Pfam NB-ARC domain 1 213 IPR002182 GO:0043531
Accr6g01336 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 226 IPR027417 -
Accr6g01336 759 SUPERFAMILY "Winged helix" DNA-binding domain 202 308 IPR036390 -
Accr6g01336 759 SUPERFAMILY L domain-like 332 581 - -
Accr6g01336 759 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 510 IPR044974 GO:0006952
Accr6g01336 759 Gene3D Ribonuclease Inhibitor 276 625 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01336 Accr-Chr6 41625075 41627787 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01336 407 528 WRKY Transcription Factor Family AT4G12020 36.000 9.43e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01336 - - pcin:129289419 881.708