Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01334 ATGGCTGCTGCTTCTTCTTCCGCCTGGACTTATGACGTGTTTTTGAGTTTTAGAGGCGAAGACACTCGTTATGGTTTCACTTCTTATCTTTATAATGCTCTAAAACAGTCAGGAATCCATACTTACAGGGATAATTCAGAGCTTGAACGAGGAGAAGGAATGAAGGTCTCATTATTGCAAGCAATTGAAAGATCACGAATGGCGTTAGTAATTTTGTCTCAAAATTATGCATCTTCCAGTTGGTGTCTGGATGAGCTGGTGAAAATAATGGAGTGTCAAGTAACTCTAGGTCTGGTGGTTATTCCCATATTCTATAATGTAGATCCGTCTCATGTTCGTCGTCAGAGTGGCCCATTTGGTGAAGCAATGCAACGACACAAGATAAGGTGGGAAAGGGAGGAGAAGAGTGATCGGGTGCTGCGATGGAGGCAGGCACTCACGAAAGTTGCCTACTTGAGTGGCTTTGATTCCAAACAATCAAGGTATGAATCTGAGATGATCGAGCAAATTGTTAATGATGTTTTACAAAAATTAGACATTGGACAATTGTTTGTTGCTGACCATCCAGTGGGAATAGAAACACGAGTTCATGAATTGACATTTGAATGGTCAAAAAGGAGATCCCAAAAATCTCTCATCATAGGCATCAAGGGAACAGGAGGTAGTGGCAAAACAACTGTTGCGAAAGCTATTTACAACAAAATTGGTCATCAATTTAGAGCAAGAAGTTTTCTTGCAAATATAAGAGAAATTTCAAAGCATGCTAATGATCAAGTTAATTTGCAAAGGCAACTCATTTATGATATCACTAAAACACAAGTTTTCGAGATCCCTGACATTGATAGAGGAAAAAAAATAATTCAAGAAAGATTTCCCAACATACAATCATTTGTTGTATTGGATGATGTGGATAGTGTCAACCAACTGAATGCTTTATGTGGGAGTCTTCAATGGTTTTGTCCAGGAAGTGTAATAGTCATAACTACTAGAGATATGCACCTGCTTAATGTCCTTAAAGCTGATCATAAGTACAACATGAGAGAAATGAACAAAATTGAGTCTCTTGAGCTTTTAAGTTGGTATGCCTTTAAGCAAGCAGTTCCTTTGAATGAAGACTTTAGAGAACTCTCTGAAAATGTAGTTGCTTACTGTGGTGGACTTCCACTAGCTCTTGAAATCCTTGGTTCTTGTTTGCATGAGAGAACAATTCAAGAATGGAGTGCTGCATTGTCCAAACTAAAAAGCATTCCTAATAAAGATATACACGCAAAGTTAAAAATAAGTTATGATGGATTGAATGATCATATGGAGAAGGATATCTTCCTTGACATATGTTGCTTCTTCATCAATAAGGATAGGAGCTATGTTACACAGATATTAGATGGTTGTGGACTTCATGCAAAAAATGGACTACAAGTCCTCATAGAGCGGGGCCTCTTAAAAGTCAGTAGAAACAGTAAGCTTGAAATGCATGATTTATTACAAGAAATGGGGAAAGAAATTATCCGTGAAAGCCCCCCTAAAGATCCCGAGGAACATAGTAGATTATGGTTTCATGAAGAAGTACTTGATGTGCTAAGAGAACATACGGGAACCAAAGCAATTGAAGGTCTATCTCTGAAGGAGCCTGGAACCCATAGAGAGCATCTCATTGATTCTAAGGCGTTTAAGGAGATGAGAAAACTTAGATTGCTCCAACTAGATTATGTAAACCTTAAAGGAGATTATGCGCTTCTTTCCAAAAGGCTGAGGTGGATTTGTTGGCATGGATTTCCATTGGAATTCACTCCAAACACCTTTTACCAAGAAAAATTAGTTGCTATTGACTTCAAATATAGCAACCTCAAAGTAGTTTGGAAAGAGCCCCAGTTGATGGAGATGTTAAAGACACTCAATCTCAGTCATTCGTCTAAACTAAAAGAAACTCCCGATTTTACAAAACTACCAAACCTTGAAAGGCTAGTGATGAAAGATTGTCAAAGTTTGATTTTAATTGATGAGAGCATCGGAGATCTAAAAAATCTCCTTCATGTGAATCTAAAAGATTGCAAGAGCCTTAGAGAGCTTCCTAGAAGCATCTACAAGTTAAAATCATTAAAAACTCTCATTCTTTCTGGATGTTTATTGATTGACCATTTAGAGGAAGATTTTGAGCAAATGGAGGGGTTGACAAGTCTTATGGCAGATAATACTGCCATAACACAGGTACCATTTACATTAGCAAGATTGAGAGGGTTTGTACAACATGGATATGTATCTTTGTGTGGGTATGAAGGAAGAGCACAAGATATATTTCCTTCTCTCGTATCGTCTTGGATGTCACGTAGCAATATTCCCCAATCCCCTATTGAAGAATTTGTACAAAGCATATCATCTCTAGTCTTTTCAGTTGGACAAAATAGTGGCTTTCATGGGATATCTACATCTCAGTTTGCAAGGCCAGCAGGTTCCTTCATTTCTCTCTTACTTCAACTAGGATGGTGCGACAAAGCAGACTTCCTGAAAGACAAAATTTCACAGGTATGTAATTATGGTGGATGGGATGATTCTCACCTACCTGGTGATCATTATCCTGATTGGTTCATATATAAGGGTGAAGGATACTCAGTAAAGTTTAAGGTGCCTCAAGTGATAGGTTGTCAATTGAAAGCAATGCTTCTCAATGTTGTGTATTTTTCCTGCATGGATAACACAACAACGCCTCAATTTCTCATAAATGTCGTGATTATCAACTACACCAAGGCTACTATTATGCAACACGTTGGAGACTGGGTAACTTTTCATAAAGATGCAAAGTGGCAGAGTATCATTCCAAGTGTTCAACCTGGCGATCTGATGGAGCTTGTTTTAAGTATTGGGCCTCAATTTCCAGTGAAGAAGATTGCAGCTTACTTGATATATGACAGTTCTAAGCGTCGCAAGTTATTGAAATAA 2934 0.3814 MAAASSSAWTYDVFLSFRGEDTRYGFTSYLYNALKQSGIHTYRDNSELERGEGMKVSLLQAIERSRMALVILSQNYASSSWCLDELVKIMECQVTLGLVVIPIFYNVDPSHVRRQSGPFGEAMQRHKIRWEREEKSDRVLRWRQALTKVAYLSGFDSKQSRYESEMIEQIVNDVLQKLDIGQLFVADHPVGIETRVHELTFEWSKRRSQKSLIIGIKGTGGSGKTTVAKAIYNKIGHQFRARSFLANIREISKHANDQVNLQRQLIYDITKTQVFEIPDIDRGKKIIQERFPNIQSFVVLDDVDSVNQLNALCGSLQWFCPGSVIVITTRDMHLLNVLKADHKYNMREMNKIESLELLSWYAFKQAVPLNEDFRELSENVVAYCGGLPLALEILGSCLHERTIQEWSAALSKLKSIPNKDIHAKLKISYDGLNDHMEKDIFLDICCFFINKDRSYVTQILDGCGLHAKNGLQVLIERGLLKVSRNSKLEMHDLLQEMGKEIIRESPPKDPEEHSRLWFHEEVLDVLREHTGTKAIEGLSLKEPGTHREHLIDSKAFKEMRKLRLLQLDYVNLKGDYALLSKRLRWICWHGFPLEFTPNTFYQEKLVAIDFKYSNLKVVWKEPQLMEMLKTLNLSHSSKLKETPDFTKLPNLERLVMKDCQSLILIDESIGDLKNLLHVNLKDCKSLRELPRSIYKLKSLKTLILSGCLLIDHLEEDFEQMEGLTSLMADNTAITQVPFTLARLRGFVQHGYVSLCGYEGRAQDIFPSLVSSWMSRSNIPQSPIEEFVQSISSLVFSVGQNSGFHGISTSQFARPAGSFISLLLQLGWCDKADFLKDKISQVCNYGGWDDSHLPGDHYPDWFIYKGEGYSVKFKVPQVIGCQLKAMLLNVVYFSCMDNTTTPQFLINVVIINYTKATIMQHVGDWVTFHKDAKWQSIIPSVQPGDLMELVLSIGPQFPVKKIAAYLIYDSSKRRKLLK 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01334 977 Gene3D - 175 344 IPR027417 -
Accr6g01334 977 Pfam NB-ARC domain 194 431 IPR002182 GO:0043531
Accr6g01334 977 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 730 IPR044974 GO:0006952
Accr6g01334 977 SUPERFAMILY "Winged helix" DNA-binding domain 420 526 IPR036390 -
Accr6g01334 977 PRINTS Disease resistance protein signature 213 228 - -
Accr6g01334 977 PRINTS Disease resistance protein signature 384 398 - -
Accr6g01334 977 PRINTS Disease resistance protein signature 290 304 - -
Accr6g01334 977 PRINTS Disease resistance protein signature 623 639 - -
Accr6g01334 977 SMART till_3 10 152 IPR000157 GO:0007165
Accr6g01334 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 444 IPR027417 -
Accr6g01334 977 Gene3D - 7 174 IPR035897 -
Accr6g01334 977 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 180 - -
Accr6g01334 977 ProSiteProfiles TIR domain profile. 9 178 IPR000157 GO:0007165
Accr6g01334 977 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 155 IPR035897 -
Accr6g01334 977 SUPERFAMILY L domain-like 550 802 - -
Accr6g01334 977 Gene3D Ribonuclease Inhibitor 539 774 IPR032675 -
Accr6g01334 977 Pfam TIR domain 11 178 IPR000157 GO:0007165
Accr6g01334 977 Gene3D - 348 433 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01334 Accr-Chr6 41572025 41576846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01334 6 743 WRKY Transcription Factor Family AT4G12020 29.528 1.12e-74 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01334 - - pcin:129287706 1038.1