Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01328 ATGGCAAACGCAAAAGAATCAGGCGTTGAGCTTGATGTGAAGCTGGTAGGAGGACCAATTCTAGTTGCACCTGCAGAAGAAACAGACAAAGGACTTTACTTCCTGTCAAACCTTGACCAGAACGTAAAATTTATAGTTGACTCAGTTTATTGTTTCAAATCTGGTTCGAGAGGGAACGAGGATGCTGCAACAGTTATCAGACAATCCTTGTCCAAAGTTCTTGTCCCTTATTATCCCATGGCTGGCAGGTTAGCTATCAGTTCTGAAGGGAAATATATTGTGAATTGTACCGGCCAGGGCGTTTTGTTCGTTGAGGCTGAAGAAACAAACTGTGAGATAGAGGAAATTGAAGATTTGCTCTCAAAGCCTGATCCTTCAAATCTTGGCAAACTGGTTTATACTTTTGCTGGTGCCAACAAAAACATACTTGAAATGCCTCTCTTGACTGTTCAGGTGACAAAATTCAAATGTGGAGGATTTACTTTGGGGTTGTTCAATAACCACGGTATGCAAGATGGAATGTGTGCTATGGAATTTGTAAATGCATGGGGTGAAATTGCAAGAGGCTTGGACTTAAAAAATCCTCCATTTCTTGATAGAACCGTACTCAAAGCACGCGAGCCTCCTCTTATAGAATTCCCACACAATGAATTTTATGAAGACATACAAGACATATCAGATACCACAAAGCTATACAAGGAAGAAGACTTAATCTGCAAGTCCTTCTGCTTCGATCCGCAGAAAGTAGAGCTTCTCAAGAACAAGGCCACGCAAGATGGTGTTCTTCCCAGGTGCTCTACTTTTGAAGCGCTTTCTGCTTTTGTATGGAGAGCTCGAACCGAAGCCTTGAGGATGAAACCTAATCAACAAACCAAGCTTATCTTCGCAGTTAATGGACGGTCCCGATTCGTTCCTCCAATACCTGAAGCTTACTTCGGGAACGCCACGATGTTGCAACATTCACTGTGTGAAGCTGGTGAGTTATTGAAGAATCCTCTGTCGTTCGCTGTTGGGTTGGTTCAAAAGGCTATTGATTTGTTTACGGATAGGTACATGAGATCCGGTATTGACTATTTTGAGATGACCAGAAGAGGTTGGCCTTCCTTAACAGCGACGCTTTTGATTACAACTTGGACTAGGTTGTCTCTCCACACAACAGATTTTGGATGGGGACAGCCTCTGTGTTCTGGGCCTGTCACCTTGACGGACAGAGACATGGTCTTGTTCCTCTCTCATGGGCATGAGAGGAAGAACATAAATGTTCTTCTGTGTTTGCCTGCTTCTGCCATGGGAATCTTTGAAGCTCTGATGATGCAGTTATGA 1323 0.4331 MANAKESGVELDVKLVGGPILVAPAEETDKGLYFLSNLDQNVKFIVDSVYCFKSGSRGNEDAATVIRQSLSKVLVPYYPMAGRLAISSEGKYIVNCTGQGVLFVEAEETNCEIEEIEDLLSKPDPSNLGKLVYTFAGANKNILEMPLLTVQVTKFKCGGFTLGLFNNHGMQDGMCAMEFVNAWGEIARGLDLKNPPFLDRTVLKAREPPLIEFPHNEFYEDIQDISDTTKLYKEEDLICKSFCFDPQKVELLKNKATQDGVLPRCSTFEALSAFVWRARTEALRMKPNQQTKLIFAVNGRSRFVPPIPEAYFGNATMLQHSLCEAGELLKNPLSFAVGLVQKAIDLFTDRYMRSGIDYFEMTRRGWPSLTATLLITTWTRLSLHTTDFGWGQPLCSGPVTLTDRDMVLFLSHGHERKNINVLLCLPASAMGIFEALMMQL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01328 440 FunFam Spermidine hydroxycinnamoyl transferase 13 218 - -
Accr6g01328 440 Gene3D - 17 220 IPR023213 -
Accr6g01328 440 FunFam Tryptamine hydroxycinnamoyl transferase 223 438 - -
Accr6g01328 440 Gene3D - 221 439 IPR023213 -
Accr6g01328 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 436 - -
Accr6g01328 440 Pfam Transferase family 21 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01328 Accr-Chr6 41356659 41359518 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01328 21 440 Monolignol Biosynthesis Gene Families AT5G48930 35.023 4.55e-80 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01328 K15400 - gmx:100794490 609.372