Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01323 ATGGTTCTGAGTAGCCGAACTTTCTGTGCTCATGTTATTATTATTAATTTCTTGTTGCTTCTTAGTTGTAACATGGTCTATGGGACTCCCACTGATATCTTCTGCTTGAGAAGCGTAAAAAATTCTCTTCAAGACCCATATGGTTATTTGAATTCTTCATGGGATTTCAACAACAACACAGAAGGATTTATCTGTAGATTTACTGGTGTTGAGTGTTGGCACCCTGATGAGAACAAAGTCTTAAATCTTAAGTTGTCAAATATGGGACTCAAGGGCCAGTTTCCTCGTGCCATTCAAAACTGCACCAGCTTAACAGGGTTGGATCTATCAATTAACAAACTTTCTGGAACAATCCCAGCAGATATCAATAATATCCTTAAATATGTGACAAGTCTTGATCTATCTTCAAATGAATTTTCTGGGATTATCCCTGTGAATCTTGCGAATTGTTCTTATCTCAATTCCCTTAAACTGGATCAAAATCAACTCACCGGGCAAATTCCTGGACAATTCAGCACACTTTCAAGGCTCAAAGTATTTACTGTCACAAACAATCTTTTGACGGGGCAAATTCCAAGCCTTCCGAATATCTCAGCTGATAGCTATGCTAATAATCCTGGACTATGTGGTAGTCCTTTGCAAACCTGCCAGGCCCCACCGTCCAAGAGTAACTCTGCAGTTATAGCCGGAGCAGCGGTTGGTGGGGTGACGGTTGGAGCATTAGCAATAGGCATTGGATTGTTCTTCTTTGTCAGACGAGTATCGGTGATCAAGAAGGAAGAAGACCCTGAAGGCAACAAATGGGCAAGAAATCTAAAGGGAACTAAAGGAATAAAGGTTTCAATGTTTGAGAAGTCAGTTTCAAAAATGAAATTGAGCGATCTCATGAAGGCTACTAACAACTTCAGTAAAAGCAATATTATCGGGTCTGGAAGAACAGGAACCATGTACAAAGCTACCCTTGATGATGGCACATCACTCATGGTCAAGAGATTGCAGGAATCTCAGCACTCTGAGAAAGAATTTCTGTCTGAGATGTCTACCCTCGGGGCTGTCAGACACCGTAACTTGGTTCCCATTTTAGGTTTTTGCGTGGCCAAGAAGGAGAGGCTTGTGGTCTATAGTTTTATGTCTAATGGCACTCTTCATAACCAGCTACATCCTGCAGAAGGTCAGAGCACCCTGGAATGGCCTATAAGGCTTAAAATTGCTATTGGAGCTGCCAAAGGATTAGCATGGCTCCATCATAGCTGCAATCCCCGTATCCTCCATCGTAACATAAGTTCTAAGAGCATCTTATTGGATTCTGGTTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCTAGACTGATGAACCCAGTTGATACACATTTGAGTACTTTTGTGAATGGAGAGTTTGGGGATTTAGGTTATGTTGCTCCTGAGTACGCAAGAACACTGGTGGCTACCCCGAAGGGAGATGTTTATAGCTTTGGGGTTGTTCTTCTTGAGTTGGTGACCGGTGAAAAACCCACCCATGTGGCTAAAGCTCCAGAAACATTCAAGGGAAGTTTGGTCGAATGGATTACCGAACTCTCAAGCACCTCTGAACTGCAGAAAGCCATTGATGAATCATTGGTTGGGAATGAATTTGATAATGAGCTTTTCCAATTTCTTAAGGTTGCATGCAACTGTGTTTCATCAACTCCAAAGGAAAGGCCCACTTTGTTTGAAGTTTACCAGTTTTTAAGAGCCATTGGGAGTAGGTACAATTTCACAACTGAGGATGAGATATTGGTACCTGTAGATATTGATGATGCTGGAAATCTAGACGAACTTATTGTGGCTCGAGAAGGGAAGAATTGA 1845 0.4173 MVLSSRTFCAHVIIINFLLLLSCNMVYGTPTDIFCLRSVKNSLQDPYGYLNSSWDFNNNTEGFICRFTGVECWHPDENKVLNLKLSNMGLKGQFPRAIQNCTSLTGLDLSINKLSGTIPADINNILKYVTSLDLSSNEFSGIIPVNLANCSYLNSLKLDQNQLTGQIPGQFSTLSRLKVFTVTNNLLTGQIPSLPNISADSYANNPGLCGSPLQTCQAPPSKSNSAVIAGAAVGGVTVGALAIGIGLFFFVRRVSVIKKEEDPEGNKWARNLKGTKGIKVSMFEKSVSKMKLSDLMKATNNFSKSNIIGSGRTGTMYKATLDDGTSLMVKRLQESQHSEKEFLSEMSTLGAVRHRNLVPILGFCVAKKERLVVYSFMSNGTLHNQLHPAEGQSTLEWPIRLKIAIGAAKGLAWLHHSCNPRILHRNISSKSILLDSGFEPKISDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGVVLLELVTGEKPTHVAKAPETFKGSLVEWITELSSTSELQKAIDESLVGNEFDNELFQFLKVACNCVSSTPKERPTLFEVYQFLRAIGSRYNFTTEDEILVPVDIDDAGNLDELIVAREGKN 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01323 614 FunFam Leucine-rich repeat receptor-like protein kinase 377 587 - -
Accr6g01323 614 Gene3D Transferase(Phosphotransferase) domain 1 377 594 - -
Accr6g01323 614 CDD STKc_IRAK 308 576 - -
Accr6g01323 614 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Accr6g01323 614 FunFam Nuclear pore complex protein NUP107 30 193 - -
Accr6g01323 614 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Accr6g01323 614 Gene3D Ribonuclease Inhibitor 31 218 IPR032675 -
Accr6g01323 614 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 23 193 - -
Accr6g01323 614 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Accr6g01323 614 SUPERFAMILY L domain-like 30 213 - -
Accr6g01323 614 Pfam Protein tyrosine and serine/threonine kinase 305 575 IPR001245 GO:0004672|GO:0006468
Accr6g01323 614 ProSiteProfiles Protein kinase domain profile. 302 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g01323 614 Pfam Leucine rich repeat 129 187 IPR001611 GO:0005515
Accr6g01323 614 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 263 376 - -
Accr6g01323 614 Gene3D Phosphorylase Kinase; domain 1 263 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01323 Accr-Chr6 41189559 41191873 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01323 12 590 Receptor kinase-like Gene Family AT3G28450 48.299 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Accr6g01323 PK_Tyr_Ser-Thr 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01323 - - gmx:100817267 920.613