Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01321 ATGGTTCTGAGTAGCCGAACTTTCTGTGCTCATGTTATTATTATTAATTTCTTGTTGCTTCTTAGTTGTAACATGGTCTATGGGACTCCCACTGATATCTTCTGCTCGAAAAGCATAAAAAATTCTCTTGAAGACCCATATGGTTATTTGAATTCTTCATGGGATTTCAACAACAACACAGAAGGATTTATCTGCAGATTTACAGGTGTTGACTGTTGGCACCCTGCTGAGAACAAAGTCTTAAATCTTAAGTTATCAAATATGGGACTCAAGGGCCAGTTTCCTCGTGCCATTCAAAACTGCTCCAGCTTAACAGGGTTGGATCTATCAATTAACAAACTTTCTGGAACAATCCCAGCAGATATCAATAATATCCTTGAATATGTGACATCTCTTGATCTATCTTCAAATGACTTTTCGGGGACGATCCCTGTGGGCCTTGCAAATTGTTCTTATCTCAATTCCCTTAAACTGGATCAAAATCAACTCACCGGGAAAATTCCTGGACAATTCAGCACAATTCCAAGGCTCAAAGTATTTACTGTCACGAACAATCTTTTGACGGGGCAAATTCCAAGCCTTCCGAATATCTCAGCTGATAGCTATGCCAATAATCCTGGACTATGTGGTAGTCCTTTGCCAGCCTGCCAGGCCGACTCTGCAGTTATAGCTGGAGCAACGGTTGGTGGGGTGACAGTTGGAGCATTAGCAATAGGCATTGGATTGTTCTTCTTTGTCAGACGAGTATCTGTGATTAAGAAGGAAGAAGACCCTGAAGGCAACAAATGGGCAAGAAGTCTGAAGGGAACTAAAGGAACAAAGGTTTCAATGTTTGCGAAGTCAGTTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAAAAGAAATATTATCGGCTCTGGAAGAACGGGAACCATGTACAAAGCTGCCCTTGATGATGGCACATCACTCATGGTCACGAGATTGCAGGAATCTCAGCACTCTGAGAAAGAATTCCTGTCAGAGATGTCTACCCTCGAGGCTGTCAGACACCGTAACTTGGTTCGTCTTTTAGGTTTTTGCGTGGCCAGGAAGGAGAGGCTTGTGGTCTATAGTTTTATGTCTATTGGCACTCTCCATAACCAGCTACATCCTGCAGAAGGTCAGAGCATCCTGGAATGGCCTATAAGGCTTAAAATTGCTATTGGAGCTGCCAAAGGATTAGCATGGCTCCATCATAGCTGCAATCCCCGTATCCTCCATCGTAACATAAGCTCTAAGAGCATCTTATTGGATTCTGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTCCTACACTGATGAACCCAACTGATACACATTTCAGTACTATTACGAATGGAGATTTTGGGGATTCAGGCTATGTTTCTCCTGAGTACGCGAGAACGCTGGTGGCTACCCCGAAGGGAGATGTTTATAGCTTCGGGGTTGTTCTTCTTGAGTTGGTGACCGGTGAAAAACCCACCCATGTGGCTAAAGCTCCAGAAACATTCAAGGGAAGTTTGGTCGAATGGATTACCGAACTCTCAAGCACCTCTGAACTGCAGAAAGCCATTGATGAATCATTAGTTGGGAATGAATTTGATAATGAGCTTTTCCAATTTCTTAAGGTTGCATGCAACTGTGTTTCATCAACTCCAAAGGAAAGGCCCACTTTGTTTGAAGTTTACCAGCTTTTAAGAGCCATTGGGAGTAGGTACAAATTCACAACTGAGGATGAGATATTGGTACCTGTAGATATTGATGATGCTGGAAATCTAGACGAACTTATTGTGGCTCGAGAAGGGAACAATTGA 1830 0.424 MVLSSRTFCAHVIIINFLLLLSCNMVYGTPTDIFCSKSIKNSLEDPYGYLNSSWDFNNNTEGFICRFTGVDCWHPAENKVLNLKLSNMGLKGQFPRAIQNCSSLTGLDLSINKLSGTIPADINNILEYVTSLDLSSNDFSGTIPVGLANCSYLNSLKLDQNQLTGKIPGQFSTIPRLKVFTVTNNLLTGQIPSLPNISADSYANNPGLCGSPLPACQADSAVIAGATVGGVTVGALAIGIGLFFFVRRVSVIKKEEDPEGNKWARSLKGTKGTKVSMFAKSVSKMKLSDLMKATNNFSKRNIIGSGRTGTMYKAALDDGTSLMVTRLQESQHSEKEFLSEMSTLEAVRHRNLVRLLGFCVARKERLVVYSFMSIGTLHNQLHPAEGQSILEWPIRLKIAIGAAKGLAWLHHSCNPRILHRNISSKSILLDSDFEPKISDFGLPTLMNPTDTHFSTITNGDFGDSGYVSPEYARTLVATPKGDVYSFGVVLLELVTGEKPTHVAKAPETFKGSLVEWITELSSTSELQKAIDESLVGNEFDNELFQFLKVACNCVSSTPKERPTLFEVYQLLRAIGSRYKFTTEDEILVPVDIDDAGNLDELIVAREGNN 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01321 609 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 372 585 - -
Accr6g01321 609 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 258 371 - -
Accr6g01321 609 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 21 193 - -
Accr6g01321 609 SUPERFAMILY Protein kinase-like (PK-like) 276 571 IPR011009 -
Accr6g01321 609 Gene3D Transferase(Phosphotransferase) domain 1 372 590 - -
Accr6g01321 609 Gene3D Phosphorylase Kinase; domain 1 258 371 - -
Accr6g01321 609 SUPERFAMILY L domain-like 30 208 - -
Accr6g01321 609 Pfam Protein tyrosine and serine/threonine kinase 300 570 IPR001245 GO:0004672|GO:0006468
Accr6g01321 609 Gene3D Ribonuclease Inhibitor 37 217 IPR032675 -
Accr6g01321 609 ProSiteProfiles Protein kinase domain profile. 297 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g01321 609 CDD STKc_IRAK 303 571 - -
Accr6g01321 609 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Accr6g01321 609 FunFam Nuclear pore complex protein NUP107 32 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01321 Accr-Chr6 41171117 41184588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01321 12 585 Receptor kinase-like Gene Family AT3G28450 46.599 1.88e-173 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Accr6g01321 PK_Tyr_Ser-Thr 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01321 - - cave:132161677 881.708