Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01317 ATGACCTCTTTCCTGAAACCTGAGAATGCTCTAAAAAGAGCAGAAGAATTGATCAATGTTGGACAGAAGCAAGATGCTTTGCAAACTCTCCATGGCCTTATCACTTCAAAAAGATATAGGGCATGGCAGAAGACACTTGAAAGGATAATGTTTAAATATGTCGAACTGTGTGTAGACATGCGGAAAGGGCGGTTTGCAAAGGATGGGCTGATTCAGTATCGAATTATATGTCAGCAAGTTAATGTTAGCTCTCTGGAGGAGGTGATCAAACATTTCATGCATCTGTCAACTGAGAAAGCTGAGCAAGCTCGAAGCCAGGCACAGGCACTAGAGGAGGCTCTTGATGTTGATGATTTAGAGGCTGATAAAAGGCCTGAAGATTTGATGCTAAGCTATGTGAGTGGGGAGAAGGGAAAAGACAGATCTGACAGGGAGGTTGTTACTCCGTGGTTTAAGTTTCTTTGGGAAACGTATAGGACTGTGCTTGAAATATTACGGAACAATTCAAAACTGGAAGCTCTATATGCTATGACAGCACATCGGGCTTTTCAATTTTGTAAGCAATATAAGCGAACAACTGAGTTTCGTAGACTTTGTGAAATTATAAGAAACCATCTAGCCAATCTTAATAAATATCGAGACCAACGGGACCGACCTGATCTTTCAGCACCTGAAAGCATGCAGCTATATCTAGACACGAGATTTGAGCAACTGAAAGTTGCCACAGAACTTGAACTCTGGCAGGAAGCTTTTAGATCTGTCGAAGATATACATGGACTAATGTGCATTGTGAAGAAAACGCCTAAGGCATCTTTGATGGTTCTCTACTATGCTAAGCTTACAGAAATATTTTGGATATCATCAAGCTATCTTTATCATGCATATGCATGGTTCAGGCTATTTTTGCTGCAGAAGAGCTTCAATAAGAATCTGAGCCAGAAGGACTTGCAATTGATAGCTTCATCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCCCATGATCACAGTCAAGGTGCATCTCATTTGGAATTGGAGCATGAAAAAGAGAGGAATTTGAGGATGGCTAATCTCATTGGTTTTAACCTTGAAAGTAAACCTGATGGTAGAGAAGTGCTTTCAAGGTCAGCCCTTCTTGCTGAACTGGTGTCCAAGGGTGTAATGTCTTGTGCAACTCAGGAAGTGAAGGACATTTATCATCAACTGGAACATGAATTTCTTCCCCTAGACCTTCCATTGAAAGTTCAGCCTCTGCTAACCAAAATATCAAAGTTAGGGGGTAAGCTCTCCTCTGCTTCTTCTGTCCCTGAGGTGCAGCTGTCTCAGTATGTTCCATCCCTGGAGAAACTAGCTACCTTGAGGTTGCTACAACAGGTGTCCAACATATACCAGACAATGAAGATTGGGACCTTATCTAGAATGATCCCCTTTTTTGATTTTTCTGTTGTGGAAAAGATTTCTGTGGATGCTGCTAAGCATAACTTTGTATCCATGAAAGTTGACCACATGAAGAGTGTTGTAGTTTTCTGCAAGAAGAGTCTTGAGTCTGATGGCTTAAGGGATTCCCTGGCTAGTCTTGCTGAATTTCTGAATAAGCCAAGACTCGTGATTTATCCTTCTGATAGCAAGCCATCAAATCTTGAAGCTTGGCTATCCAATTTGGTTGAGGCTGTAACCAAGGAACACAAGAGGCTTCTTGCACGGAAATCAATTATTGAGAAGCGAAAAGAAGAACAAGAGCGACAGCTTCTTGAAATGGAAAGAGAGGAGGAATCAAAAAGATTGAGACAGCAGAAAATAACTGAAGAAGCAGAACAAAGAAGACTTGCCAATGAGTATGAGCAGAGGAAGAACCAGAGAATACTCAGAGAAATAGAAGAACGAGAATTGGAAGAAGCTCAAGCGTTGCTTCAGGAAGCTGAGAAGCGGATTAAAAAGAAGGGAAAGAAGCCAATCATTGAGGGTGAAAAAATGACGAAGCAAACACTGATGGAGTTGACTTTGACTGAACAACTCCGGGAAAGACAAGAAATGGAAAAGAAACTTCAAAAACTAGCTAAAACGATGGACTACTTGGAAAGAGCTAAAAGAGAGGAGGCTGCTCCCTTGATTGAAGCTGCATATCAAAAGCGCCTTGTTGAAGAAAAGCTTCTTCATGAGCGTGAGCAACAGCTTGAGATTGAAGTTAGCAAACAGTGCCATGAGGGAGATCTCAAGGAGAAGGAAAGACTGGCTCGTATGGTTGGCAATAAGGAGATTTATCAAGAGAGGGTTGTCAGTCGTCGTCAGGAAGAATTTAATAGATTGAGGCGTGAAAGAGAGGAGCGAATCTCAAGGATTTTACAGTCCAGGAGACTAGAGAGGGAAAAGATGAGGAAGTTGAAGTACTATCTGAGATTAGAGGAAGAGAGACAGCAAAAATTGAGGGAAGAAGAGGAAGCTAGGAAGCGTGAAGAGGCCGAGAGGCGGAAGAAGGAAGAGGCTGAGCGCCTGGCGAAATTGGCTGAGATAGCCGAAAAGCAGAGGCAAAGAGAGAGGGAACTTGAAGAGAAGGCAGAGAGGCAGAAGAAAGAAGCACTGTTTGGCAGAGGTGGTGAAGCCGCTGTGAAGCCTCTTGAACCTTCAGCCCGCACATTGGAGGCTGGATCTGCTGCTCCTGCAGCAGCAGCAGCCGCCGCCGCTCCTGCACCAAGCTCTGGGAAATATGTACCTAAGTTCCGGCGTGAGAGAACTGAAGGCCCAGCTGCTGCCACTCCTCCAGAAACTGACCGATGGACAAACCCCAGCAGGCAGGATGGTGGTGACAGATGGCGTAGTGATGATCGAAGACCTGCTTTCGGTTCTGGCGGGGGTTCAAGGTCATCATCAACATGGTCCTCATCCAGGCGCGATCGTTGA 2895 0.4415 MTSFLKPENALKRAEELINVGQKQDALQTLHGLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDREVVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESMQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCIVKKTPKASLMVLYYAKLTEIFWISSSYLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHSQGASHLELEHEKERNLRMANLIGFNLESKPDGREVLSRSALLAELVSKGVMSCATQEVKDIYHQLEHEFLPLDLPLKVQPLLTKISKLGGKLSSASSVPEVQLSQYVPSLEKLATLRLLQQVSNIYQTMKIGTLSRMIPFFDFSVVEKISVDAAKHNFVSMKVDHMKSVVVFCKKSLESDGLRDSLASLAEFLNKPRLVIYPSDSKPSNLEAWLSNLVEAVTKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRQQKITEEAEQRRLANEYEQRKNQRILREIEERELEEAQALLQEAEKRIKKKGKKPIIEGEKMTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQKRLVEEKLLHEREQQLEIEVSKQCHEGDLKEKERLARMVGNKEIYQERVVSRRQEEFNRLRREREERISRILQSRRLEREKMRKLKYYLRLEEERQQKLREEEEARKREEAERRKKEEAERLAKLAEIAEKQRQRERELEEKAERQKKEALFGRGGEAAVKPLEPSARTLEAGSAAPAAAAAAAAPAPSSGKYVPKFRRERTEGPAAATPPETDRWTNPSRQDGGDRWRSDDRRPAFGSGGGSRSSSTWSSSRRDR 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01317 964 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 525 IPR000717 -
Accr6g01317 964 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Accr6g01317 964 Gene3D UVR domain 217 267 - -
Accr6g01317 964 Coils Coil 615 649 - -
Accr6g01317 964 Coils Coil 796 857 - -
Accr6g01317 964 Gene3D - 268 343 - -
Accr6g01317 964 Gene3D - 362 493 - -
Accr6g01317 964 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 964 IPR027512 GO:0005852
Accr6g01317 964 MobiDBLite consensus disorder prediction 804 964 - -
Accr6g01317 964 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Accr6g01317 964 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Accr6g01317 964 MobiDBLite consensus disorder prediction 927 942 - -
Accr6g01317 964 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Accr6g01317 964 Coils Coil 561 600 - -
Accr6g01317 964 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 955 IPR027512 GO:0005852
Accr6g01317 964 MobiDBLite consensus disorder prediction 804 862 - -
Accr6g01317 964 Coils Coil 667 697 - -
Accr6g01317 964 Coils Coil 93 120 - -
Accr6g01317 964 Pfam PCI domain 373 508 IPR000717 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01317 1 961 Eukaryotic Initiation Factors Gene Family AT4G11420 72.802 0.0 1309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01317 K03254 - gmx:100782598 1335.47