Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01279 ATGAGTACTACTGCTTTAAGTATGGAGCTGAAAGTAGAAGAAGATGGGAAGCCTTTGGGGGAGAGAGAATCAGAAGAAACTACAGAGGAAAAAGCTGTGGATGTTGAGAACAATAACGAGCTGGAGGCCATGAATGAATCTGGTTTGCTAAATGAAGAGGTCATAAAGAAGAAGGGGTCCTTGAGAGAGAGAGTTTCTTCCAATAATATTTCTGAACGAACAGAGTCTGCAAATAAGAAAGGTATTCCCAATAAGCAGATTAAGGAGGAGGAGGAAGAAGAAGAAGAAGGAAGCTTGAAAGAGTATGTTTGGGCTGACAAGTATCAACCCAAGGCATTGCAAGAATTTATCTGCCATAAACATATTGTTTCTCAGCTTCTAACAATGATAAAGGTGGGATGTGTTTGTGAACATTTTATATTTGAAGGACCACCTGGTGTAGGAAAGAGGACCATGATACGAGCTCTACTTCGAGAGGTCTTTGGCTACGACGAAGTCAAGGTGATTGAGGAGTATAGAACATTCGTATTAAAGGGGGAGGTGATAGAAAGCATCCAAGTGCCAATAATAAAATCAGTACATCATGTAGAGGTCAATCTCTCTCAAACAAAAGGGTATGAGGAACTAGTGGTTGCTGAATTGTTAAGAGAAACTTACGACAAGATCATCAATATTTCAATGCCTTGCGAGCCTCAAAACTGCCACGCCATAATTGTATACGAGGCCGAGAAACTATCATCAGGATCATTGTTGTACATAAAGTGGATGCTTGAAAGGTATAATAATGGTTGCAATAAAGTTTTCTTTTGCTGCGCTGATGAATCCAAGCTCCAAATTGTCAAACCTCTCTGCAAAACTTTTCGTCTTTCTCCTCCCACTCAAGAGATTGTTGAGGTTATGAAATACATAGGGAAAGAAGAAGGAAAAGATTTGTCCACAGAATTCCTTACGAAGGTTGTTGACAAGTCAAAGAACAATCTTCGTCAGGCCATTCGTTCTTTGGAGGCGACTTGCCTGAACAACGATTCAATCAAAGATGACGTGTTAATTTTAACAGGATGGGAAGATGACATCTCAAATATTGCTAAGACTATACTTAAAGAGCAAAGTTCAAAACAGCTATACAATATTCATCTGAAGCTTCAAAGTCTCATGATTCACAAGGTTTCACCTCATTTTGTTTACAAGTATTTGATATCTGAGCTAAAATCTATGGTAGATGAATCACTAAAACCAGGTCTTGAAAAACTCATGGAGCACAATCAAAATGCACATGGAATCAAGATGAGGAGGGGGAAGCATTCTGGTCATGGTCACAACAAAGAAAGAGAATCTGATGAAACGAACAATGAAACATCAAAGAAGAAAGCTTGCAGTTACTCAGAAGTTGAAGAATTCATAGCAAAATTCATGAATTGGTACAAGAGTTCAGCTGCAAAAAGTGATAATTGTAACTGA 1458 0.3861 MSTTALSMELKVEEDGKPLGERESEETTEEKAVDVENNNELEAMNESGLLNEEVIKKKGSLRERVSSNNISERTESANKKGIPNKQIKEEEEEEEEGSLKEYVWADKYQPKALQEFICHKHIVSQLLTMIKVGCVCEHFIFEGPPGVGKRTMIRALLREVFGYDEVKVIEEYRTFVLKGEVIESIQVPIIKSVHHVEVNLSQTKGYEELVVAELLRETYDKIINISMPCEPQNCHAIIVYEAEKLSSGSLLYIKWMLERYNNGCNKVFFCCADESKLQIVKPLCKTFRLSPPTQEIVEVMKYIGKEEGKDLSTEFLTKVVDKSKNNLRQAIRSLEATCLNNDSIKDDVLILTGWEDDISNIAKTILKEQSSKQLYNIHLKLQSLMIHKVSPHFVYKYLISELKSMVDESLKPGLEKLMEHNQNAHGIKMRRGKHSGHGHNKERESDETNNETSKKKACSYSEVEEFIAKFMNWYKSSAAKSDNCN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01279 485 Gene3D - 293 352 - -
Accr6g01279 485 Gene3D - 102 292 IPR027417 -
Accr6g01279 485 Gene3D - 353 474 - -
Accr6g01279 485 MobiDBLite consensus disorder prediction 10 37 - -
Accr6g01279 485 FunFam replication factor C subunit 3 292 350 - -
Accr6g01279 485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 347 IPR027417 -
Accr6g01279 485 MobiDBLite consensus disorder prediction 424 455 - -
Accr6g01279 485 Pfam Rad17 P-loop domain 103 209 - -
Accr6g01279 485 MobiDBLite consensus disorder prediction 61 93 - -
Accr6g01279 485 SUPERFAMILY post-AAA+ oligomerization domain-like 353 413 IPR008921 GO:0003677|GO:0006260
Accr6g01279 485 MobiDBLite consensus disorder prediction 438 455 - -
Accr6g01279 485 MobiDBLite consensus disorder prediction 1 48 - -
Accr6g01279 485 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 104 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01279 Accr-Chr6 40027815 40033476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01279 103 476 Core DNA Replication Machinery Family AT5G27740 29.024 6.14e-43 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01279 K10756 - gmx:102664389 484.567