Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01232 ATGACAACGGATTCGTCTCTCGAAGGTTTCACACTTGATCCTGCTAAATGCAGTAAATTGAGTATGGAGGAAAAAAGAGAACTTGTATATGAAATATCTAAGTGGCCAAATGATGCATTGGAAATGCTACAGTCATGGAGCCGTCAAGAGATTTTACAAATCCTTTGTGCTGAGATGGGGAAAGAGAGGAAGTATACTGGATTAACAAAGGTGAAAATTATAGAAAACCTTCTGAAAATTGTTTCTGAAAAGAAATCTGGAGCTCAAGAAACTGCAACAGACCCTGAACCACATTCTTCCACTTCACATGGCCAGAAACCTGCTAAAAGGCAGAGGAAAAATGAGAATCCGTCTCGATTACCTGTTCCAATAAATGATGTTTCTGTCAACAATGGAGTTGGAGATGTAAGTAGTACTTCGTATTGCAAAAACACAGCTTGCAAAGCTACCCTGAGTGAAGCAGATGCGTTTTGTAAAAGATGCTCTTGCTGCATTTGCCATAAATATGATGACAACAAAGATCCTAGCCTTTGGTTAATATGTGGCTCTGAGCCTCCATTTTTTGGTGTTTCTTGTGGCTTGTCATGTCATCTTGAGTGTGCTTTAAAGCATGATAATTCGGGCATTTCCAAAGATGGAAAACGTCCCAAGCTTGATGGAAGCTTCTACTGCATCTCATGTGGGAAAGTGAATGATTTGCTCGGATGCTGGAGAAAGCAACTGATGGTGGCAAAGGATACTAGACGTGTTGACATACTATGCTACCGTGTTTCCTTGAGCCAAAGAATTTTTCAAGGGACTGAAAAGTATAAAAAACTTCATGAAATTGTTAATGAGGCAGTTAGGAAACTTGAACCTGAATTGGGCCCACTAACTGGTTCACCAGTGAAGATTGGTAGGGGCATTGTGAACAGACTTTCATCAGGGCCAGAGGTTCAGAAACTCTGTGGTTTGGCTTTGGAATCATTAGATTCTTTTCTTTCTAAAAGGGTTACGCCTCTGTCACCTGATCCAACAATTCAAGATGCAAATATGGTTGCTGCAAATATGGTGAGATTCAAAGATGTCAGGGATACATCTCTGACTGTGATTTTGGGTTCTGAAGATGCTTCTGAAGAAAATATCAGTGGCTATTCCCTTTGGCATCGCAAGGCTATTGATGAGGAATATTCTGTTGAACGAACTTGCACTTTGGTTCTACCTGACAGAAGTTTCAATGTAAGGGGTCTAATTCCAGCTACAAAATATAGTCTCAAAGTTGTTTCCTATAATGGCACAAGGGAGATGGGTATGTGTGAAGTTCAAATCTCAACAGAGCCTGGCGAGTATGAAGTTCCGAACTGTTCAGCAACCGAAAGAAGTCAGAGCCCAATAACCAACTGTAGCAGCCATTCCAATCCTTCGTCAGTGGAAGATGAAACCAATAACAGTAATCCATTTAGTGATCAGACTGATGATCGGGCGGATAATTATCTTACTTATCACAAGGATGCTGACAAGCTTGCCTCTGAAAATTTATCCAATGATGTTATTAAATGTTCCAACGCGGTTGGAGGTGGACGACCTGCCGATGCAGATTCTTTGTCAGAAAAGCAACGGCCTAGAGGCTTGGCTGTAAATATACCTGGTTCTGAAATTCTGAAGCTTGAAAAGAACCATTCACCAGAGGGACAAATCACTGAGGACTTGAGCACTGATGATGGGTTAAATTCCCCTGTTCAGACCGGGAGGGAATGTGTCCCACTCATACGTAGCTCAGAAGCAAGTTTGCCTATTACTCCTTGCAAGTTGGAAATACTCAAGGATGGGCCGGGAAGAAGTGGGAGATCCAAGTCCATGGGTAAGGATCAAGAAAATGGGTCTGGGAAGAGAGAAGGCCCTCAAGATGGAAGCACATCTAAGAAAAGAGCTGAACAAAGGCAAGACGAGGGCTGCGCTGTGAACGGGTATTCGGATCGGGATTTTGAGTATTACGTGAAGGTGATCAGATGGCTTGAGTGTGAAGGACACATAGAAAAGAACTTCAGACAGAAATTTCTGACATGGTACAGCTTGAGAGCAACACCACAGGAAGTAAAGATTGTTAAAGTATATATTGATACATTTCTCGAAGATCCAGCTTCTCTTGCAGAGCAGCTTGTGGACACATTCTCAGAATGCTTATCAAACAAAAGACCATCTGTTGTGCCAGCTGGGTTCTGCATGAAGCTCTGGCATTGA 2220 0.4216 MTTDSSLEGFTLDPAKCSKLSMEEKRELVYEISKWPNDALEMLQSWSRQEILQILCAEMGKERKYTGLTKVKIIENLLKIVSEKKSGAQETATDPEPHSSTSHGQKPAKRQRKNENPSRLPVPINDVSVNNGVGDVSSTSYCKNTACKATLSEADAFCKRCSCCICHKYDDNKDPSLWLICGSEPPFFGVSCGLSCHLECALKHDNSGISKDGKRPKLDGSFYCISCGKVNDLLGCWRKQLMVAKDTRRVDILCYRVSLSQRIFQGTEKYKKLHEIVNEAVRKLEPELGPLTGSPVKIGRGIVNRLSSGPEVQKLCGLALESLDSFLSKRVTPLSPDPTIQDANMVAANMVRFKDVRDTSLTVILGSEDASEENISGYSLWHRKAIDEEYSVERTCTLVLPDRSFNVRGLIPATKYSLKVVSYNGTREMGMCEVQISTEPGEYEVPNCSATERSQSPITNCSSHSNPSSVEDETNNSNPFSDQTDDRADNYLTYHKDADKLASENLSNDVIKCSNAVGGGRPADADSLSEKQRPRGLAVNIPGSEILKLEKNHSPEGQITEDLSTDDGLNSPVQTGRECVPLIRSSEASLPITPCKLEILKDGPGRSGRSKSMGKDQENGSGKREGPQDGSTSKKRAEQRQDEGCAVNGYSDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVKIVKVYIDTFLEDPASLAEQLVDTFSECLSNKRPSVVPAGFCMKLWH 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01232 739 Gene3D Immunoglobulins 347 443 IPR013783 -
Accr6g01232 739 Pfam Fibronectin type III domain 351 426 IPR003961 GO:0005515
Accr6g01232 739 MobiDBLite consensus disorder prediction 516 575 - -
Accr6g01232 739 MobiDBLite consensus disorder prediction 85 125 - -
Accr6g01232 739 MobiDBLite consensus disorder prediction 602 642 - -
Accr6g01232 739 CDD FN3 351 425 IPR003961 GO:0005515
Accr6g01232 739 PANTHER VIN3-LIKE PROTEIN 2-RELATED 10 739 IPR044514 GO:0010048|GO:0040029
Accr6g01232 739 MobiDBLite consensus disorder prediction 558 572 - -
Accr6g01232 739 MobiDBLite consensus disorder prediction 86 104 - -
Accr6g01232 739 CDD PHD_VIN3_plant 162 227 - -
Accr6g01232 739 MobiDBLite consensus disorder prediction 599 643 - -
Accr6g01232 739 SUPERFAMILY Fibronectin type III 352 426 IPR036116 GO:0005515
Accr6g01232 739 ProSiteProfiles Fibronectin type-III domain profile. 346 442 IPR003961 GO:0005515
Accr6g01232 739 MobiDBLite consensus disorder prediction 443 487 - -
Accr6g01232 739 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01232 Accr-Chr6 37797793 37802530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01232 4 606 PHD Gene Family AT4G30200 47.867 1.97e-163 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01232 - - gmx:100819331 1177.16