Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01229 ATGTCGTCGTCTTCTTTGGAATCTGATTTTCAGTACCACGCCTTCTTAACTATCAGCCATTCCAGAGGATATGTGATGAGAGACTTCCAAAAATACTTTAGAGATGTTGGAATCAAGACTTTGATTGATGATAAGAGGATGGATTTTCCCATGCACAGGATTTTATGTTGCAGAATGCTTGTAGTTGTTTTCACACCAGGATTCCTTGAGTCCGACATATTTCTCAAGAGACTTGTTAATTTATGGCAGTGTCAACAACTTCGGAATAAACAAGTGTTGGCTGTATTCTATGGATTGAGCGAGGAGCAAGTACGTGAGCAGCTGCAGGGTATGGATCACAGAAGATTATTCGAGACTAGTCCCGAATCAGAATTCAGGGCTCTACCTGGTTGGATTTTAGATTCAGCAACAGCCATAGCTGAAATTGCTTCGTTATCTGATTTGGGGAATAAAGTCAGACGCCGCTTGGCAAACTTAGATCTTTCCATATTCAATGATGAGTCGTTTGGTGATCTTCCACTCCATCAAGTAGGGTTACCAATTCGTGTGAGAGAATTGCTTAAAATTTTGAGGTGGAGATATATTTTGTTAGATGATACAATCATAATTGGAATCTGGGGAGATAGTGGTATTGGTAAAACTACGATTGTCAAAGCTTTTTATGATAGAATTGGTGGATATTTTGAGGGTAAAAGTTTCCTTTCAAATAATAGGAAAGTATGTGGGGAAGAAAATGTTGGTGTTAGCCTCATGAAGCAACTTATTTTTGATATTTCTGAAACTGAATTTGATGAGACAAATGTTGATATGATGCATGAACAAATGAAGCAAGTACTCTATCAAAGAAGAGTGTTAGTTGTACTTGATGATGTAAATAGTGAATTTCAGCTCCAGAACTTGACTGTAAATATTAAAAAGTGGTGTGATAAAGGGAGCTTGATATTCATTACATCACTAAATGATGTTATGTTTAAATATCTCCCTGTTGACATAATATATGAAATGAAAAGGTTAAATAGTGGGGAATCTCTTGAGCTTTTTTGCTTGCATGCATTTAAGAAATCCAATCCAAAGATTGGTTTTAGGGATTTTTCGGAGTGGGTCATTGAATACTGTGAAGGATTGCCATTGGCTCTTGAAGTTTTTGGCTCTCTTTTGCATAAGAAGACAGAAAAAGAGTGGAAAATAGTAGTGAATGACATGGAAGGAATCCTTCATGGTGTAATACAAAAGAAGCTTAAAATCAGTGTTGACTTATTAACTAATATAGAAAAAGATTTGTTTTTTAATATAGCTTGTTTTTATGTGGGCCAAAGTAAAGACTATGTTACACAATTGCTCAGTAGCTCAAGACCTCATGTACAAAGGGCAATGTCATTACTCATTGGTCATAAACTTGTAAAGGTCATGGACGACAAGTTTTATGTTCATGATTTGCTACAAGAGATAGGAAGGGAAATCAGACCAAGTAATCCAAAGCCCAAATATAGCTATGATGTATTCTTAAGTTTCAGAGGTGATGATACTCGTAGATCTTTTACTTCTCATCTTTGTGCTGCTTTAAAGCAAGCGGGTATTGAGGTCTACATGGATGAAGAAAGAATTGAAAGGGGAGAAATTATTTCATCTTCACTACTAGAAGCAATTGAAAGTTCGAGAATTTCAATCATTATCTTCTCAAAGAATTATGCTGACTCAAGTTGGTGCTTACAAGAGTTAGAGAAAATCATGGAGTGTTACAAAGCAACTTCTCAAGAAGTTTTACCCATATTTTTTGATGTGCGGCCTTTTGAAGTTCGTAAACAACAAAATGCCTTTGGAAAAGCATGGGAAAGACTTATCAAGAGAACTTCAAGTAGCAAAATGAAGAAATTGACAATCAATTTAAAGAGAGCTCTCGTAGAAGTCTCCAATTTATCTGGGTGGGACATGCATAACTACAGAACTGAAACTGAGCTGATTGATGAAGTAATTGAAACTATCACAAAGAAGTTAGGTAACAACAAATGTCTATTTATCGCGCACCATCCAGTGGGATTGAAGTCTCGTATGCTGGATATCCTCCAATTGCTTCAAAGTAAATCAAAGGATCTTGTCATTGTAGGGATTTGGGGGATGGGGGGGATTGGTAAGACAACTATTGCTAAAGCCATCTACAATGAAGTTGGTCAAAGTTTTGAAGGAAAGTGTTTTCTTACAAATGTTAGAGAAGTTTGGAAGCAAGATAATGGTCATGTTCATTTGCAAGAACAACTTCTTTCGGACATTTTAAAATCAAAAGGGATGGCAATACGAAATATAGAAATGGGGAAAACTTTGCTCAAACAAAGACTTAGCAAGAAAAGAGTAATTGTTGTACTTGATGACGTCAATAATGAAAACCAACTCAATGCATTATGTGGAAGTTGGGAATGGTTTGGTCATGGCAGTAGAATCATCATTACAACTAGAGATGAACATTTGCTCAAGATCCTTGGGGTAATTCATGTATACACCATGAAAGAATTGGATGATAATGAATCTCTTGAACTTTTTAGTTGGCATGCATTTAAGCAAGTGATCCCTGAACAAGATTTCACTGAACTTTCAAGAAGACTAGTTTCTTATTCTGGAGGGTTGCCACTAGCTCTTGAAATCCTTGGATCCTATTTATTTGATAGAGAAATATTGATTTGGAAAAGTGTTTTGGAGAAATTACAACAAATTCCAAATCCTCAAATCCATGAAATACTTAAAATAAGCTATGATGGTTTGAGTGACAATACAGAGAAAGAAATATTTCTTGACATATGTTGTTTCTTTGTTGGGAAGGACAAAAGCTATGTGACACAAATATTAAATGGATGTGGATTTTATGCAGATATTGGAATTAAACGTCTGATAGAGTTATGCCTTCTAAGAGTTTGCTATAAAAATAAGCTTGAAATGCATAACCTATTGCGTGACATGGGAAGAGAAATTATTCGTGAGCAGTCACCAAAAAAGCCCGGGGGACGTACTAGATTATGGTCTTATGATGATGTGTTGGATGTATTGAGAAATGAAAGTGTAACAAGATCCGTAGAAGGATTGGCTTTAAACATGTCAAGAAACAATTCTTCGTCTTTGAGTGCCGATATGTTTAAGAAGATGAAGATGCTTCGTTTGCTTCAACTTGTTAACGTACAACTTACAGGAGACTATGATTATCTATCAACAAATTTGAGATGGCTTTCTTGGCATGGATTTCCTTTAGAAAACATTCCAGTGAACTTCAATCTAGAAAAGATAGTTGCCATTGACTTAAAGTGGAGCAATCTTGTGAAAGTATGGAAGAAAAGTCAGTTGTTGGAGGAGTTGAAATGCATCAATCTTAGTCATTCGCATTACTTGACAGAAACACCTGACTTTTCAAATATACCACATCTTGAAAAGTTAATAGTTAGAGATTGTCCACGATTATCTATAATTCACCCTTCAATTGGTGATCTCAAATGTATCCTTCTATTAAACTTTAAGGACTGCAAAAGCCTCAAACACCTCCCAAGCAATGTATATAAATTGAAATCCTTGAAAACCCTTATCGTTTGTGGTTGTTCAAAGATTGACAAGCTAGAAGAAGACATTGGGCAAATGGAATCCTTGACAACTTTGGATGCAACTCAAACTGCTATAGCACAAGTGCCATTCTCGTTAGTGGGATTGAAAAGTATTAAAAATTTGTCTATATGTGGTTATGAAGGATCACCTCGTGATGTATTTCCATCTCTTGTTTTGTCTTGGATGTTACCAACACATCGTTCAAAGTCCTTGTCTCGAGCATTTCAGATCTTACCTTCTTTAATTAGGGGTGTATCACATCCTTTATTTTCAAGAAGATATGAAATAGCAAATGATGATAGACCAAGCACGTCTCAAGCCTCATGTCAAAATACTCCAACCTTACTTGAATTTCATGAGCAAGTTCACAAGGAAAGGTTAGAAACATTGATGAATTCTCTGACTATTCAAGTAGGGTGGTTCAACAAAACTATGGATACCCTTCTGGAGAGTATTTCAAAGGGATGGAATACTACTGTTGGGCTTGAATTTTCTCTTCCAGTTGACAATTATCCAGATTGGCTAGTTTTCTCAAATGAGGGATCTTCTCTATCATTTCAAGTCCCTCAAGTTGTTGGTCGTCGCTTAAAAGGAGTTGTCCTCTACATTATCCATTCATCTCTTCAAGATAGCATGGCGTCTGTACATTCCATTGGTATTATGATAAATAATTTCACAAAGGGTACCATGGATTTATACAAGCGAGAAGTTGCAACAACTTCTGCCAATGAAGAATGGCAGAACAATCTAATCATAAATAATTTGGAGCCTCGAAATGAGGTGGAAGTTGAAATTAAGCTTGGTCTTAAATATATTGTGGTGAAGAAGACCGTAGCCTATCTTTTATATGCCGAAGAAGCTAACAATCTGATCACCTCCGAATGA 4464 0.3611 MSSSSLESDFQYHAFLTISHSRGYVMRDFQKYFRDVGIKTLIDDKRMDFPMHRILCCRMLVVVFTPGFLESDIFLKRLVNLWQCQQLRNKQVLAVFYGLSEEQVREQLQGMDHRRLFETSPESEFRALPGWILDSATAIAEIASLSDLGNKVRRRLANLDLSIFNDESFGDLPLHQVGLPIRVRELLKILRWRYILLDDTIIIGIWGDSGIGKTTIVKAFYDRIGGYFEGKSFLSNNRKVCGEENVGVSLMKQLIFDISETEFDETNVDMMHEQMKQVLYQRRVLVVLDDVNSEFQLQNLTVNIKKWCDKGSLIFITSLNDVMFKYLPVDIIYEMKRLNSGESLELFCLHAFKKSNPKIGFRDFSEWVIEYCEGLPLALEVFGSLLHKKTEKEWKIVVNDMEGILHGVIQKKLKISVDLLTNIEKDLFFNIACFYVGQSKDYVTQLLSSSRPHVQRAMSLLIGHKLVKVMDDKFYVHDLLQEIGREIRPSNPKPKYSYDVFLSFRGDDTRRSFTSHLCAALKQAGIEVYMDEERIERGEIISSSLLEAIESSRISIIIFSKNYADSSWCLQELEKIMECYKATSQEVLPIFFDVRPFEVRKQQNAFGKAWERLIKRTSSSKMKKLTINLKRALVEVSNLSGWDMHNYRTETELIDEVIETITKKLGNNKCLFIAHHPVGLKSRMLDILQLLQSKSKDLVIVGIWGMGGIGKTTIAKAIYNEVGQSFEGKCFLTNVREVWKQDNGHVHLQEQLLSDILKSKGMAIRNIEMGKTLLKQRLSKKRVIVVLDDVNNENQLNALCGSWEWFGHGSRIIITTRDEHLLKILGVIHVYTMKELDDNESLELFSWHAFKQVIPEQDFTELSRRLVSYSGGLPLALEILGSYLFDREILIWKSVLEKLQQIPNPQIHEILKISYDGLSDNTEKEIFLDICCFFVGKDKSYVTQILNGCGFYADIGIKRLIELCLLRVCYKNKLEMHNLLRDMGREIIREQSPKKPGGRTRLWSYDDVLDVLRNESVTRSVEGLALNMSRNNSSSLSADMFKKMKMLRLLQLVNVQLTGDYDYLSTNLRWLSWHGFPLENIPVNFNLEKIVAIDLKWSNLVKVWKKSQLLEELKCINLSHSHYLTETPDFSNIPHLEKLIVRDCPRLSIIHPSIGDLKCILLLNFKDCKSLKHLPSNVYKLKSLKTLIVCGCSKIDKLEEDIGQMESLTTLDATQTAIAQVPFSLVGLKSIKNLSICGYEGSPRDVFPSLVLSWMLPTHRSKSLSRAFQILPSLIRGVSHPLFSRRYEIANDDRPSTSQASCQNTPTLLEFHEQVHKERLETLMNSLTIQVGWFNKTMDTLLESISKGWNTTVGLEFSLPVDNYPDWLVFSNEGSSLSFQVPQVVGRRLKGVVLYIIHSSLQDSMASVHSIGIMINNFTKGTMDLYKREVATTSANEEWQNNLIINNLEPRNEVEVEIKLGLKYIVVKKTVAYLLYAEEANNLITSE 1487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01229 1487 Pfam NB-ARC domain 689 904 IPR002182 GO:0043531
Accr6g01229 1487 Pfam NB-ARC domain 199 415 IPR002182 GO:0043531
Accr6g01229 1487 Gene3D - 662 828 IPR027417 -
Accr6g01229 1487 Gene3D - 175 328 IPR027417 -
Accr6g01229 1487 Gene3D - 835 919 IPR042197 -
Accr6g01229 1487 Gene3D - 337 421 IPR042197 -
Accr6g01229 1487 Pfam TIR domain 498 667 IPR000157 GO:0007165
Accr6g01229 1487 SUPERFAMILY L domain-like 1026 1249 - -
Accr6g01229 1487 Gene3D - 495 661 IPR035897 -
Accr6g01229 1487 SUPERFAMILY "Winged helix" DNA-binding domain 906 1012 IPR036390 -
Accr6g01229 1487 FunFam Disease resistance protein (TIR-NBS-LRR class) 494 667 - -
Accr6g01229 1487 ProSiteProfiles TIR domain profile. 496 665 IPR000157 GO:0007165
Accr6g01229 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 429 IPR027417 -
Accr6g01229 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 668 930 IPR027417 -
Accr6g01229 1487 SMART till_3 497 639 IPR000157 GO:0007165
Accr6g01229 1487 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 498 1222 IPR044974 GO:0006952
Accr6g01229 1487 Gene3D Ribonuclease Inhibitor 1012 1278 IPR032675 -
Accr6g01229 1487 PRINTS Disease resistance protein signature 700 715 - -
Accr6g01229 1487 PRINTS Disease resistance protein signature 777 791 - -
Accr6g01229 1487 PRINTS Disease resistance protein signature 870 884 - -
Accr6g01229 1487 PRINTS Disease resistance protein signature 1179 1195 - -
Accr6g01229 1487 SMART AAA_5 199 339 IPR003593 GO:0016887
Accr6g01229 1487 SMART AAA_5 697 834 IPR003593 GO:0016887
Accr6g01229 1487 Gene3D - 1 120 IPR035897 -
Accr6g01229 1487 SUPERFAMILY Toll/Interleukin receptor TIR domain 489 642 IPR035897 -
Accr6g01229 1487 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 111 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01229 Accr-Chr6 37644608 37658578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01229 57 487 WRKY Transcription Factor Family AT4G12020 24.062 2.30e-19 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01229 - - pcin:129288830 1665.97