Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01227 ATGTCTTCTTTTTCTTTGGAATTCGATCTTGACAACCGCGCCTGCATAACTATCAGCCATCACACACCTGATGTGATATTCTACTTGGAAAAATACTTTAAAGATGTTGGAATCAAGACTTGGATTGATGATATGGCGGAGGAGTGTCCCAGGGCCGATTTTAAATCGTGCAGAATGCATGTGGTTGTTTTCACACCAGTATTCCTTGAGTCCGGCATATTTTTCAAGAGACTTCTGACTATAAGGCGGAATCAAGAACTTCTCAATAAAACAGTGGTGGCTGTATTCTGTGGATTGAGCGAGGAGCAATTACGGGAGCAAGTACGTCCCGATTCAGAATTATGGACTCGAACTGCTTGGATTTTAGATTCAGCGACAGCCATAGCTGAAGTTGCTTCGATATCTGATTTCGGGAATAAATTGAGAAGCCGCAAGGCACACTTAAGTCTTTCCATGTTGAATGATGAGTCTTTTGATGATCTTCCACACCATCAAGTAGGGTTACCACGCCGTGTGAGAGAATTGCTTAAAATTTTGAGGCGGAGATATATTTTGTTAGATGATACAATCATAGTCGGAATCTGGGGAGCCAAAGGTATTGGTAAAACTACGATTGTCAAAGCTTTTTATGATAGAATTGGTGGCTATTTTGAGGGTAAAAGTTTCCTTTCATATAATAGGAAAGTATATGGGGAAGAAAATGCTGGTGTTAGTCTCATGAAGCAACTTATTTTTGATATTTCTGAAACTGAACTTAATGAGACGAATGTTGTTGTGATGCATGAACACATGAAGGAAGTACTCTATCAAAGAAGAGTCTTGGTTGTACTTGATGGTGTAAATAGTGAACTTGAGCTCCAGAAAGTGTGCAAAAATGTTAAAAAGTGTTGTGGTAAGGGGAGCTTGATATTCATTACATCACTAGGTGATGTTAGGTTTAAATATCTCCGTGCTAACATAATATATGAAATGAAAAGGTTAAATAGTGAGGAGTCTCTTGAGCTTTTTTGCTTGCATGCTTTTAAGCAATTCAATCCAAAGATTGGTTTTAGGGATTTTTCAAAGCGGGTCATTGAATACTGTGAAGGGTTACTATTGGCTCTTGAAGTTTTTGGCTCTCTTTTACATAAGAAGACAGAAAAATACTGGAAAAGAATAGTGAATAAATTGGAAGCAATCCCTCATGGTGTAATACAAAACAAGCTTAAAATCAGTGTTGACTCATTAACTAATACAGAAAAAGATTTATTTTTTAATATAGCTTGTTTTTATGTGGGCCAAAGTGAACACTATGTTACACAATTGCTCAGAAGCTCAACACTTCATGTAGAAATGGGAATGTCGTCACTCATTGCTCATAACCTTGTAAAGGTCATGAACGACAAGCTTTATGTTCATGATTTGCTGCAAGAGATAGGAAGGAAAATCATTCAAAAAAGTAAGCCAAAGCCCAAATATAGCTATGATGTGTTCTTAAGCTTTAGAGGTGATGATACTCGTAGATCTTTTACTTCTCATCTTTGTGCTGCTTTAAAGCAAGCGAGTATTGAGGTCTACATGGATGAAGAAAGAATTGAAAGGGGAGAAATTATTTCATCTTCACTACTGGAAGCAATTGAAAGTTCGAGAATTTCAATAATTATCTTCTCAAAGAATTATGCTGACTCAAGTTGGTGCTTACAAGAATTAGACAAAATCATGGAGTGTTACAAAGCAACTTCTCAAGAGGTTTTACCCATATTTTTTGATGTGAGACCTTTTGAAGTTCGTAAACAACAAAATGCCTTTGGAAAAGCATGGGAAAGACTTATCAAGAGAACTTCAATTAGCAAAAGGAAGAAATTGACAATCAATTTAAAAAGAGCCCTCGTAGAAGTTGCCAATTTATCTGGATGGGACATGCATAACCACAGAACTGAAACTGAGCTGATTGATGAAGTCATTGAAACTGTCACAAAGAAGTTAGGTAACAACACATGCCTATTTGTCGCTCACCATCCAGTAGGATTGAAGTCTCGAATGCAAGATATCCTCCAATTGCTACAAAGTAAATCAAGGGATGTTATCATTGCAGGGGTTTGGGGGATGGGGGGGATTGGTAAGACAACTATTGCTAAAGCCATCTACAATGAAGTTGGTCAAAATTTTGAAGGAAAGTGTTTTCTTACAAATGTTAGAGAAGCTTGGAAGCAAGAAAATGGTCATGTTCATTTGCAAGAACAACTTCTTTCGGACATTTTAAAATCAAGAAGGATGGCAATACCGAATATAGAAATGGGGAAAACTTTGCTTAGACAAAAACTTAGCAAGAAAAGAGTAATTGTTGTACTTGATGATGTCAACAATGAAAACCAACTCAATGCATTATGTGGAAGTAGGGAATGGTTTGGCCATGGCAGTAGAATCATCATTACAACTAGAGATGAACATTTGCTCAAGATCCTTAGGGTAATTCATGTATACACCATGAAAGAATTGGATGACAATGAATCTCTTGAACTTTTTAGTTGGCATGCATTTAAACAAGCGGTACCTGAACAAGATTTCGCTGAACTTTCAAGAAGGCTAGTATCTTATTCTGGAGGGTTGCCACTAGCTCTTGAAATACTTGGATCCTATTTATTTGATAGAGAAATATTGATTTGGGAAAGCGTTTTGGAGAAATTACAACAAATTCCGAATCATCAAATCCATGAAATACTTAAAATAAACTATGATGGTTTGAGTGACAATACAGAGAAAGAAATCTTTCTTGACATATGTTGTTTCTTTGTTGGGAAGGACAAAAACTATGTGATGCAAATATTAAATGGTTGTGGATTTTATGCAGATATCGGAATCAAGCGTCTGATAGAGCTAAGCCTTGTAAGAGTTTGCTACAAAAATAAGCTTGAAATGCATAACCTATTGCGTGACATGGGAAGAGAAATTATTCGTGAACAGTCACCAAAAAAGCCAGAGAAACGTACTAGATTATGGTCTTATGATGATGTGTTGGATGTATTGATAACTGAAAGTGGAACAAGATCTATAGAAGGGTTGGCTTTAAACATGTTAAGAAACAATTCTTCATCCTTGAGAGTCGATATGTTTAAGAAGATGAAGATGCTTCGTTTGCTTCAACTTGTTAATGTACATCTTACAGGAGACTATGATTATCTATCAACAAATTTGAGATGGCTTTCTTGGCGTGAATTTCCCTTGGAAAACATGCCAATGAACTTCAATCTAGAAAAGATAGTTGCCATTGACTTAAAGTGGAGCAATCTTGTGAAAGTATGGAAGAAAAGCCAGTTGTTGGAGGAGCTGAAATGCATCAATCTTAGTCATTCTCATTACTTGACAGAAACACCTAACTTTTCAAATATACCACATCTTGAAAAGTTAATACTTAAAGATTGTCCACGGTTATCAATAATTCACCCTTCAATTGGTGATCTCAAATGTATCCTTCTGTTAAACTTAAAGAACTGCAGAAGCCTCAACCACCTCCCAAGAAATGTATATAAATTGAAATCCTTGAAGACCCTTATCGTTTGTGGTTGTTCGAAGATTGATAAACTAGAAGAAGACATTGGGCAAATGGAATCTTTGACAACTTTGGATGCAACTCAAACTGCTATAGCACAAGTGCCATTCTCGTTAGTGAGATTGAAAAGTATTAAACTTTTGTCTATATGTGGTTATGAAGGATCACCTCGTGAAGTATTTCCATGTCTTGTTTTGTCTTGGATGTCACCAACACATCGTTCAAAGTCATTGTCTCGAGCATTTCGAATCTTTCCTTCTTTAATTAGGGGCATATCATATCCTTTATTTTCAAGAAGATATGAAATAGCAAATGATAGACCAAGCACGTCTCAAGCCTCATGTCAAAATACTCCAGCCGTACTTGAATTTCAGGAGCAAGTAAACATGAAAAGGTTAGAAACATTGATGACTTCTTTGACTATTCAAGCAGGGTGGTTCAACAAAACTATGGATACCCTTCTGAAGAGTATTTCAAAGGTGTTTCTCTTTATCTTTTATTTCTACCACATATACATAATATTTTCCAATATCTGTAGAATACCTTTCTGCTTTGCATATGTATGTTTAAACAGCTATCAAGTAAATGCTTTTTTAGAGTTGAAAGCACAATAA 4143 0.3613 MSSFSLEFDLDNRACITISHHTPDVIFYLEKYFKDVGIKTWIDDMAEECPRADFKSCRMHVVVFTPVFLESGIFFKRLLTIRRNQELLNKTVVAVFCGLSEEQLREQVRPDSELWTRTAWILDSATAIAEVASISDFGNKLRSRKAHLSLSMLNDESFDDLPHHQVGLPRRVRELLKILRRRYILLDDTIIVGIWGAKGIGKTTIVKAFYDRIGGYFEGKSFLSYNRKVYGEENAGVSLMKQLIFDISETELNETNVVVMHEHMKEVLYQRRVLVVLDGVNSELELQKVCKNVKKCCGKGSLIFITSLGDVRFKYLRANIIYEMKRLNSEESLELFCLHAFKQFNPKIGFRDFSKRVIEYCEGLLLALEVFGSLLHKKTEKYWKRIVNKLEAIPHGVIQNKLKISVDSLTNTEKDLFFNIACFYVGQSEHYVTQLLRSSTLHVEMGMSSLIAHNLVKVMNDKLYVHDLLQEIGRKIIQKSKPKPKYSYDVFLSFRGDDTRRSFTSHLCAALKQASIEVYMDEERIERGEIISSSLLEAIESSRISIIIFSKNYADSSWCLQELDKIMECYKATSQEVLPIFFDVRPFEVRKQQNAFGKAWERLIKRTSISKRKKLTINLKRALVEVANLSGWDMHNHRTETELIDEVIETVTKKLGNNTCLFVAHHPVGLKSRMQDILQLLQSKSRDVIIAGVWGMGGIGKTTIAKAIYNEVGQNFEGKCFLTNVREAWKQENGHVHLQEQLLSDILKSRRMAIPNIEMGKTLLRQKLSKKRVIVVLDDVNNENQLNALCGSREWFGHGSRIIITTRDEHLLKILRVIHVYTMKELDDNESLELFSWHAFKQAVPEQDFAELSRRLVSYSGGLPLALEILGSYLFDREILIWESVLEKLQQIPNHQIHEILKINYDGLSDNTEKEIFLDICCFFVGKDKNYVMQILNGCGFYADIGIKRLIELSLVRVCYKNKLEMHNLLRDMGREIIREQSPKKPEKRTRLWSYDDVLDVLITESGTRSIEGLALNMLRNNSSSLRVDMFKKMKMLRLLQLVNVHLTGDYDYLSTNLRWLSWREFPLENMPMNFNLEKIVAIDLKWSNLVKVWKKSQLLEELKCINLSHSHYLTETPNFSNIPHLEKLILKDCPRLSIIHPSIGDLKCILLLNLKNCRSLNHLPRNVYKLKSLKTLIVCGCSKIDKLEEDIGQMESLTTLDATQTAIAQVPFSLVRLKSIKLLSICGYEGSPREVFPCLVLSWMSPTHRSKSLSRAFRIFPSLIRGISYPLFSRRYEIANDRPSTSQASCQNTPAVLEFQEQVNMKRLETLMTSLTIQAGWFNKTMDTLLKSISKVFLFIFYFYHIYIIFSNICRIPFCFAYVCLNSYQVNAFLELKAQ 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01227 1380 SUPERFAMILY L domain-like 1031 1233 - -
Accr6g01227 1380 Pfam NB-ARC domain 188 408 IPR002182 GO:0043531
Accr6g01227 1380 Pfam NB-ARC domain 674 901 IPR002182 GO:0043531
Accr6g01227 1380 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 111 IPR035897 -
Accr6g01227 1380 SMART till_3 487 629 IPR000157 GO:0007165
Accr6g01227 1380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 655 920 IPR027417 -
Accr6g01227 1380 Gene3D Ribonuclease Inhibitor 1003 1272 IPR032675 -
Accr6g01227 1380 Gene3D - 825 909 IPR042197 -
Accr6g01227 1380 Gene3D - 149 311 IPR027417 -
Accr6g01227 1380 Gene3D - 656 820 IPR027417 -
Accr6g01227 1380 ProSiteProfiles TIR domain profile. 486 655 IPR000157 GO:0007165
Accr6g01227 1380 Gene3D - 483 655 IPR035897 -
Accr6g01227 1380 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 488 1212 IPR044974 GO:0006952
Accr6g01227 1380 PRINTS Disease resistance protein signature 767 781 - -
Accr6g01227 1380 PRINTS Disease resistance protein signature 690 705 - -
Accr6g01227 1380 PRINTS Disease resistance protein signature 860 874 - -
Accr6g01227 1380 PRINTS Disease resistance protein signature 1145 1161 - -
Accr6g01227 1380 FunFam Disease resistance protein (TIR-NBS-LRR class) 484 657 - -
Accr6g01227 1380 SMART AAA_5 687 824 IPR003593 GO:0016887
Accr6g01227 1380 SMART AAA_5 188 328 IPR003593 GO:0016887
Accr6g01227 1380 Pfam TIR domain 488 657 IPR000157 GO:0007165
Accr6g01227 1380 SUPERFAMILY Toll/Interleukin receptor TIR domain 480 632 IPR035897 -
Accr6g01227 1380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 418 IPR027417 -
Accr6g01227 1380 Gene3D - 327 414 IPR042197 -
Accr6g01227 1380 SUPERFAMILY "Winged helix" DNA-binding domain 896 1002 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01227 Accr-Chr6 37535687 37545545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01227 166 484 WRKY Transcription Factor Family AT4G12020 23.220 8.66e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01227 - - pcin:129288830 1503.8