Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01224 ATGCATTCGAGCCAGTTCGACGGTGCTGCAGTCTTCTCCGGCGGTGGTTTTATGCCATCTCAGGCAACTCAAGCCCTTGAATCTTCCTTCTCCTACTCTAAGAATCGTGATGCTCAGTCATTGCTTCCTCTGACGGTCAAGCAGATAAATGATGCATTTCTGTTAAGTGATGATAAATCTAACATGATTATCGATGGCGTGGGTGTTAAGAATGTCACTCTTGTAGGAAGGGTGTGCAACAAAGCTGGAAGGATTACTGATGTTACTTTTGTACTAGATGATGGGACCGGAAGGATTGAGTGTAGTAAATGGCTCCAAGAAGATGTAGACACCAATGAAGCGGAGGGTATCAGGGATGGAATGTATGTGCGCTTACATGGACATTTGAAAGGTTTTCAGGGAAAAAGGACCTTAAATGTATTCTCTTTTAGGTGTGATGTTAATATAATGTCTAAGTTTAGCAGTTCAGTATTTTAA 477 0.4193 MHSSQFDGAAVFSGGGFMPSQATQALESSFSYSKNRDAQSLLPLTVKQINDAFLLSDDKSNMIIDGVGVKNVTLVGRVCNKAGRITDVTFVLDDGTGRIECSKWLQEDVDTNEAEGIRDGMYVRLHGHLKGFQGKRTLNVFSFRCDVNIMSKFSSSVF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01224 158 CDD RPA2_DBD_D 71 144 - -
Accr6g01224 158 FunFam replication protein A 32 kDa subunit A-like 34 154 - -
Accr6g01224 158 Pfam OB-fold nucleic acid binding domain 72 142 IPR004365 GO:0003676
Accr6g01224 158 PANTHER REPLICATION PROTEIN A-RELATED 5 145 IPR040260 -
Accr6g01224 158 SUPERFAMILY Nucleic acid-binding proteins 41 145 IPR012340 -
Accr6g01224 158 Gene3D - 33 153 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01224 Accr-Chr6 37520049 37521364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01224 3 144 Core DNA Replication Machinery Family AT2G24490 57.343 1.05e-52 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01224 K10739 - jre:108998915 236.498