Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01220 ATGGGAGAGGAGAAGAAACCAGAGGAAGCGAAAATGGAGGAGAAGAAGTCGGAGGAGCCCAACAAGGCGGAGGAGGGGAAGAAAGCAGCCAAAGAAGAAGCTAAACAGCCGGAAAAACCCAATGACTCCCAAGATGCTGGCGACGGCAAGGAATCTAAAGAACAAACTCCGCCGCCTCCGCCTGATATTATGCTCAAAATTGACTTGCACTGTGAAGCTTGTGCTAAGAAGATTCGTCGTTCGCTTATAGGATGGCCAGGTGTTGAAGATGTTATCACAGATTTTAAGACTAATAAACTGGTTGTGAAAGGAGCGAAGGCAGATCCCCTTAAGGTATCGGAGAGAGTATATAGGAAGACCGGAAAAAAGGTTTCAATTCTTTTGGCACGATACGATGTGTTCTTGAGCTTCAGAGGTGAAGACACTAGGGCATCTTTCACTTCTCATCTCTCCTCCTCCTTAAGCAATGATGGAATTGTTGTTTTCAAAGATGATACTGACCTTCCTCGGGGGAATAATATCTCAGAAGAACTGCAACGTGGAATTGAAAATTCTACAATTTCAATCGTTATCTTCTCTAAAGATTATGCTGGTTCAAGATGGTGCCTCAACGAGCTCTCAAAAATCATGGAGGTTCACAGACTTCAAGGTCGGGTAGTTTTGCCTGTGTTCTATGACGTGGATCCATCTGAAGTTCGTAATCAAATCTCTAGTTTTGGAGATTCATTTCAAGATCTTATACAAAAAAGTTCATTGACACATGATCAAGTATTGAGGTGGAGGACAGATCTCCGTGAAGCTGGGGGCATAGCAGGTTTTGTTGTGCTCAATTCCAGGAATGAAAGTGAGGATATCAAGAATATTGTTACGCATGTTTGTGAAATATTGGACAAGAAAGACATGTTTATTGCTAACTATCCTATAGGATTGGACTCTCGCATGGAAAATTTGATAAAAATGTCAGAAAGCCATCCACCAAATGATGTTCTCGTGCTAGGGATATGGGGGATGGGTGGTATAGGTAAAACAGTGATTGCCAAAGCCATTTACAATGAAATTGGTCGAAATTTTGAGAGTAGAAGTTTTCTTTTAAATATTAGGGAAGTTTGGGAGCAACATCGTGGTCCAGTTCGCCTGCAACAACAACTTCTTTCTCAAATATGTAAAACGCCGAAGATGAAAATATATTGCATTGAGTCAGGAAAAAGCATATTAAAAGATAGACTTCGCCAAAAGCGAGCACTTGTTGTTCTTGATGATGTGGATAATGTGGAGCAACTAAATGCTTTATCTGGAGAAGGTAAATGGTTTCTTTCAGGAAGTAGAATAATCATCACGACTAGAGATGAACGTCTACTAAGATTCCTTAATGTTGATGCGAACCATGTATATAGAATGAAGAACATGGATGAAAGTGAATCTATTGAGCTTTTTAGTTGGCATGCTTTTAGGCAATCAAGTCCTAAAGAAGGGTATGTTGAACTTTCTAGAAACATAGTTGCTTATTCTGGAGGATTGCCACTTGCTCTTGAAATTCTTGGCTGCCATTTGCTTAACACCCCAGTGATTGAGTGGGAGAGTGTATTAGACAAGCTAAAAAAGTTCCCCGATGATCAGATACAAAAGAAGCTAAAGATAAGCTTTGATGGTTTAAACAGTGATACGGAGAGAGAAATCTTCCTTGATATAGCTTGCTTCTTTATTGGAATGGACAGGAATGATGTCACACAGATATTGAATGCCAGTGGATTTTCTGCAGACCATGGTATTTCTGTCCTTGTGGAGAGAAGCCTTGTAACCATTGATGAGAATAATAAGCTTGGTATGCATGATTTGTTGCGAGATATGGGAAGAGAAATAATTCGTAAAGAGTCACCAAAAGGTTTCGGAAAGCGTAGTAGGTTATGGTTTTATGAAGATGTGATTGACGTCTTATCAAAAGATGCCGGTACAGAATTTGTTGAGGGGCTAGCTTTGAATCTACCACAAGATGATAAAGTTTCTTTTTTAACCAAAGCTTTTGACAAGATGAACACACTCAGACTACTTCGTCTTGTTAATGTGAAACTTGATGGAGACTATAAATACATTAGTAGAGATCTCAAATGGCTCTGCTGGCACAAGTTTCCTTTGAAATACATCCCTGTCAACTTCTTTCAAAATAATTTAGTTGCTATTGAATTAAAATATAGCAACTTGAGATTTTGGAGGGAACCCCAGCTATTGAAGAATATGAAAATCCTCAACCTTAGCCACTCTACTTACTTGATGCATACTCCTAATTTTTCAAAAATGCCAAATCTTGAAAAGTTGATCCTCAAAGATTGTCCCAGTTTGTCCATGATACATCATTCAATAGGGCATCTTGATAAAATCCATTTGATTAATTTGAAGGATTGCACTAGCCTTCACACTCTCCCAAGAAGTATTTATAAATTGCAGTGTTTAAAAACTCTCATTCTCTCTGGTTGTTTGAAGATTGAAAAGTTGGAGGAGGAAATAGAGCAGATGCATTCTTTGACCACTCTAATTGCAGATAATACAGCAATAACTCAAGCGCCTATTTCTTTAGCGAGATTAGAAAACATTGGATATATATCAATTTGTGGTTACCAAGGATTAGCACGTCATGTGTTTCCTTCTCTTATTTGGTCAAGGATGTCTCCAACAAATAATCCTTTGTCTCTTGTTCCAACATATGCTATCATGCCACCTATGATTTCATCATTAGATATATTGAATTGCACTATCCATGGTCCTTCATCAATTTATGACAACCTACCAAAGCCACAAAACCTTCAATTGGAATGCATTTTAGAGAATGACGATGTCGTAGAAGTAAATAAAGGTGCTGCAAAAATCTTGGATTCCTTATGTGCCTCAAGTTGTAGAGACTTGGCAAAAGCGCCAAATACTTCAAAAATCTTGGAGATTGAATCTTCTTTGTTGGCTGATAATAACCATAGTCAAGCTGCTACCTCAAGGCGAGACAAATGCTTGAGACACCTAATTCACATTGGCAACAATGATCAAGTCACTAGTTCTCTATCAGATTGTATTTTACAGGGTGATAAATATCCCCATTGGCAAAGCTTCAAGGGTGAAGGAGCTTCTGTAAAATTTAAAGTCCCTCCAGTTTATGGTTCTGGGTTAAAAAGGATGACTGTTTGTTGTGAGTACTACCCCTCACATGATTTGAGCAACTTGGAGTATGACCCTTTCCTTAGCATGTTGATCATAAATTATACAAAGATGGTCACTCTAGAATATAGGCGAGACACAGTGACTTCCTTTGAAGAAGCAAAATGGAAAGAAATAATATCAAATTTAGACTCTGATGACCAAGTGGAGATCAAAGCAATCTTTGGTAATGGATTGGCAGTAAAAAGAATAGCAGTTTACTTGAAATATTACAAGTCATCTCATGAACAAGTGGAGGATCTACCATCATCAAGTAGAGAAATATATAAAGATGACGACGAGAACAATGATTTTAGGCTCTTGGAGCAAGAGTGA 3516 0.3845 MGEEKKPEEAKMEEKKSEEPNKAEEGKKAAKEEAKQPEKPNDSQDAGDGKESKEQTPPPPPDIMLKIDLHCEACAKKIRRSLIGWPGVEDVITDFKTNKLVVKGAKADPLKVSERVYRKTGKKVSILLARYDVFLSFRGEDTRASFTSHLSSSLSNDGIVVFKDDTDLPRGNNISEELQRGIENSTISIVIFSKDYAGSRWCLNELSKIMEVHRLQGRVVLPVFYDVDPSEVRNQISSFGDSFQDLIQKSSLTHDQVLRWRTDLREAGGIAGFVVLNSRNESEDIKNIVTHVCEILDKKDMFIANYPIGLDSRMENLIKMSESHPPNDVLVLGIWGMGGIGKTVIAKAIYNEIGRNFESRSFLLNIREVWEQHRGPVRLQQQLLSQICKTPKMKIYCIESGKSILKDRLRQKRALVVLDDVDNVEQLNALSGEGKWFLSGSRIIITTRDERLLRFLNVDANHVYRMKNMDESESIELFSWHAFRQSSPKEGYVELSRNIVAYSGGLPLALEILGCHLLNTPVIEWESVLDKLKKFPDDQIQKKLKISFDGLNSDTEREIFLDIACFFIGMDRNDVTQILNASGFSADHGISVLVERSLVTIDENNKLGMHDLLRDMGREIIRKESPKGFGKRSRLWFYEDVIDVLSKDAGTEFVEGLALNLPQDDKVSFLTKAFDKMNTLRLLRLVNVKLDGDYKYISRDLKWLCWHKFPLKYIPVNFFQNNLVAIELKYSNLRFWREPQLLKNMKILNLSHSTYLMHTPNFSKMPNLEKLILKDCPSLSMIHHSIGHLDKIHLINLKDCTSLHTLPRSIYKLQCLKTLILSGCLKIEKLEEEIEQMHSLTTLIADNTAITQAPISLARLENIGYISICGYQGLARHVFPSLIWSRMSPTNNPLSLVPTYAIMPPMISSLDILNCTIHGPSSIYDNLPKPQNLQLECILENDDVVEVNKGAAKILDSLCASSCRDLAKAPNTSKILEIESSLLADNNHSQAATSRRDKCLRHLIHIGNNDQVTSSLSDCILQGDKYPHWQSFKGEGASVKFKVPPVYGSGLKRMTVCCEYYPSHDLSNLEYDPFLSMLIINYTKMVTLEYRRDTVTSFEEAKWKEIISNLDSDDQVEIKAIFGNGLAVKRIAVYLKYYKSSHEQVEDLPSSSREIYKDDDENNDFRLLEQE 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01220 1171 SUPERFAMILY L domain-like 623 1009 - -
Accr6g01220 1171 ProSiteProfiles Heavy-metal-associated domain profile. 60 129 IPR006121 GO:0046872
Accr6g01220 1171 MobiDBLite consensus disorder prediction 1 52 - -
Accr6g01220 1171 FunFam Disease resistance protein (TIR-NBS-LRR class) 128 298 - -
Accr6g01220 1171 Pfam NB-ARC domain 324 542 IPR002182 GO:0043531
Accr6g01220 1171 MobiDBLite consensus disorder prediction 1 64 - -
Accr6g01220 1171 ProSiteProfiles TIR domain profile. 129 296 IPR000157 GO:0007165
Accr6g01220 1171 Pfam TIR domain 131 295 IPR000157 GO:0007165
Accr6g01220 1171 SUPERFAMILY Toll/Interleukin receptor TIR domain 130 272 IPR035897 -
Accr6g01220 1171 Gene3D - 299 463 IPR027417 -
Accr6g01220 1171 Pfam Heavy-metal-associated domain 67 113 IPR006121 GO:0046872
Accr6g01220 1171 SMART till_3 130 270 IPR000157 GO:0007165
Accr6g01220 1171 SUPERFAMILY "Winged helix" DNA-binding domain 538 645 IPR036390 -
Accr6g01220 1171 MobiDBLite consensus disorder prediction 1148 1171 - -
Accr6g01220 1171 PRINTS Disease resistance protein signature 331 346 - -
Accr6g01220 1171 PRINTS Disease resistance protein signature 408 422 - -
Accr6g01220 1171 PRINTS Disease resistance protein signature 740 756 - -
Accr6g01220 1171 PRINTS Disease resistance protein signature 503 517 - -
Accr6g01220 1171 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 131 981 IPR044974 GO:0006952
Accr6g01220 1171 Gene3D Ribonuclease Inhibitor 651 957 IPR032675 -
Accr6g01220 1171 Gene3D - 468 552 IPR042197 -
Accr6g01220 1171 Gene3D - 128 298 IPR035897 -
Accr6g01220 1171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 303 563 IPR027417 -
Accr6g01220 1171 CDD HMA 64 125 IPR006121 GO:0046872
Accr6g01220 1171 Gene3D - 62 126 - -
Accr6g01220 1171 SUPERFAMILY HMA, heavy metal-associated domain 64 125 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01220 Accr-Chr6 37343488 37355525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01220 131 860 WRKY Transcription Factor Family AT4G12020 30.677 1.20e-77 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01220 - - pcin:129288835 1388.24