LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr6g01208	ATGGAGAAAGAAATATTTCTTGACATATGTTGTTTCTTTGTTGGGAAGGACAAAAACTATGTGACACAAATATTAAATGGTTGTGGATTTTATGCAGATATCGGAATTAAGCGTCTGATAGAGCTAAGCCTTGTAAGAGTTTGCTACAAAAATAAGCTTGAAATGCATAACCTATTGCGTGACATGGGAAGAGAAATTATTCGTGAGCAATCACCAAAAAAGCCAGAGGAACGTACTAGATTATGGTCTTATGATGAGGTGTTGGATGTGTTGATAAATGAAACTGGAACAAGATCCATAGAAGGATTGGCTTTAAACATGTCAAGAAACAATTCTTCATCCTTGAGTGTCGATATGTTTAAGAAGATGAAGATGCTTCGTTTGCTTCAACTTGTTAAAGTACAACTTACAGGAGACTATAATTATCTATCAACAAATTTGAGATGGCTTTCTTGGCATGAATTTCCCTTGGAAAACATGCCAATGAACTTCAATCTAGAAAAGATAGTTGCCATTGACTTAAAGTGGAGCAATCTTGTGAAAGTATGGAAGAAAAGCCAGTTGCTGGAGGAGTTGAAATGCATCAATCTTAGTCATTCTCATTACTTGACAGAAACACCTAACTTTTCAAATATACCACATCTTGAAAAGTTAATACTTAAAGATTGTCCACGATTGTCTATAATTCACCCTTCAATTGGTGATCTCAAATGTATCCTTCTATTAAACTTGAAAGACTGCAAAAGCCTCAAACACCTCCCAAGAAGTGTGTATAAATTGAAATCCTTGAAGACCTTTGTCATTGGTGGTTGTTCAAAGATTGACAAGCTAGAAGAAGACATTGGGCAAATGGAATCTTTGACAACTTTGGATGCAACTCAAACTGCTATAGCACAAGTGCCATCCTCGTTAGTGAGATTGAAAAGTATTAAACATTTGTCTATATGTGGTTATGAAGGATCACCTCGTGATGTATTTCCATCTCTTGTTTTGTCTTGGATGCCACCAACACATCGTTCAAAGTCCTTGTCTCGAGCATTTCAAATCTTAACTTTAATTAGGGGCATATCACATCCTTTAGTTTCAAGAAGATATGAAATAGCAAATGAAACACCAAGAACGTCTCAAGTCGTATGTCAAAATACTCCAGCCTTACTTGAATTTCATGAGCAAGTTCACAAGGAAAGGTTAGAAACATTGATGAATTCTTTGATTGTTCAAGTAGGGTGGTTCAACAAAACTATGGATACCCTTCTGGAGAGTATTTCAAAGGGATGGAATACTGTTGGGTTTGAACCTTCTCTTCTAGTAGACAATTATCCAGAATGGCTAGTTTTTGCAAATGAGGGATCTTCTGTATCATTTAAAGTTCCGAAAGTTGTTGGTTGCCGCTTAAAAGGAATTGTCCTCTGCATCATCTATTCATCTCTTCAAGATAACATGGCGCCTATACATTCCGTTGGTATTATGATAAGTAATTTCACAAAGGATACCATGGATTTATACAAGCGAGAAGTTGCAAAAACTTCTGCCAATGAAGAATGGCAGAACATGGTATCTAATTTGGAGCCTGGAAATGAGGTGGAAGTTGAAATTAAGCTTGATCATAAATATATTGTGGTGAAGAAGACTATAACCTATCTTTTATATGCTGAAGAAGCTGACAATCTAATCACATCTGAATGA	1686	0.36	MEKEIFLDICCFFVGKDKNYVTQILNGCGFYADIGIKRLIELSLVRVCYKNKLEMHNLLRDMGREIIREQSPKKPEERTRLWSYDEVLDVLINETGTRSIEGLALNMSRNNSSSLSVDMFKKMKMLRLLQLVKVQLTGDYNYLSTNLRWLSWHEFPLENMPMNFNLEKIVAIDLKWSNLVKVWKKSQLLEELKCINLSHSHYLTETPNFSNIPHLEKLILKDCPRLSIIHPSIGDLKCILLLNLKDCKSLKHLPRSVYKLKSLKTFVIGGCSKIDKLEEDIGQMESLTTLDATQTAIAQVPSSLVRLKSIKHLSICGYEGSPRDVFPSLVLSWMPPTHRSKSLSRAFQILTLIRGISHPLVSRRYEIANETPRTSQVVCQNTPALLEFHEQVHKERLETLMNSLIVQVGWFNKTMDTLLESISKGWNTVGFEPSLLVDNYPEWLVFANEGSSVSFKVPKVVGCRLKGIVLCIIYSSLQDNMAPIHSVGIMISNFTKDTMDLYKREVAKTSANEEWQNMVSNLEPGNEVEVEIKLDHKYIVVKKTITYLLYAEEADNLITSE	561

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr6g01208	561	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	3	316	IPR044974	GO:0006952
	Accr6g01208	561	Gene3D	Ribonuclease Inhibitor	96	333	IPR032675	-
	Accr6g01208	561	SUPERFAMILY	L domain-like	104	339	-	-
	Accr6g01208	561	SUPERFAMILY	"Winged helix" DNA-binding domain	2	91	IPR036390	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr6g01208	Accr-Chr6	35956272	35958479	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr6g01208	2	313	WRKY Transcription Factor Family	AT4G12020	32.071	7.80e-50	184

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr6g01208	-		-	pcin:129288830	709.523