Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01191 ATGAATGATGGATTCTCCTTCTCCCTCAACCTTACTTTGCAGGAGCAGGGTGTTAGTAGCTCCACTGGTGCAGTGTTTTCGGGCGAGAATAATGATAACAACGCTGTGAGACCAGGTGGTAATGACACAGGATTTGTGGCGCGTGAAGGAAACGCACCACTGAGATGGAGGAATTGCCGAGGCGTGAGGCGGCGGCCATGGGGGAAGTTCACGGCAGAGATTCGGGACCCGAAGAGGAACGGTACGAGGACGTGGCTGGGAACTTATGAGAGAGAAGAGGATGCAGCTTTGGCTTATGATAGAGCTGCTTTCCAGATGCATGGTAGAAAAGCCAAGCTCAATTTTCCACACCTCATTGGATTGGAACAACCACTGCTGGAGCCGCGAAGAGTGGTGGCTGGACAGAAGTCACGGGCCTTGCTGGAACTTTCATTGCCGTCAAACATTACATCTGAGGATGATGGATCTCAAGGGACAAGTAGGAAGAAGAGCCTCACCGGACTATTGAACAAGTTAGCAACAAAAAGAAGCCACGTCAGATTGGGTTGCTATTATGAGTAA 561 0.5027 MNDGFSFSLNLTLQEQGVSSSTGAVFSGENNDNNAVRPGGNDTGFVAREGNAPLRWRNCRGVRRRPWGKFTAEIRDPKRNGTRTWLGTYEREEDAALAYDRAAFQMHGRKAKLNFPHLIGLEQPLLEPRRVVAGQKSRALLELSLPSNITSEDDGSQGTSRKKSLTGLLNKLATKRSHVRLGCYYE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01191 186 CDD AP2 60 118 IPR001471 GO:0003700|GO:0006355
Accr6g01191 186 PANTHER DNA-BINDING DOMAIN 46 150 IPR044808 GO:0003700|GO:0009873
Accr6g01191 186 SMART rav1_2 58 122 IPR001471 GO:0003700|GO:0006355
Accr6g01191 186 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Accr6g01191 186 PRINTS Ethylene responsive element binding protein signature 98 118 IPR001471 GO:0003700|GO:0006355
Accr6g01191 186 Pfam AP2 domain 60 108 IPR001471 GO:0003700|GO:0006355
Accr6g01191 186 FunFam Ethylene-responsive transcription factor 2 58 117 - -
Accr6g01191 186 Gene3D AP2/ERF domain 59 117 IPR036955 GO:0003700|GO:0006355
Accr6g01191 186 ProSiteProfiles AP2/ERF domain profile. 58 116 IPR001471 GO:0003700|GO:0006355
Accr6g01191 186 MobiDBLite consensus disorder prediction 21 48 - -
Accr6g01191 186 SUPERFAMILY DNA-binding domain 59 117 IPR016177 GO:0003677
Accr6g01191 186 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01191 Accr-Chr6 35195169 35195729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01191 60 152 AP2-EREBP Transcription Factor Family AT2G44840 64.516 8.68e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr6g01191 AP2 1.5e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01191 K09286 - pcin:129296372 202.601