Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr6g01190 | ATGATTCCAAGTCATTCTCCTTTCCAATCAGTTCAACAATACTTAATTGAAGATGATCCTTCCTTTTTGGATCTCATGAATGATGGATTCTCCTTCTCCCTCAACCTTACTTTGCAGGAGCAGGGTGTTAGTAGCTCCACTGGTGCAGTGTTTTCGGGCGAGAATAATGATAACAACGCTGTGAGACCAGGTGGTAATGACACAGGATTTGTGGCGCGTGAAGGAAACGCACCACTGAGATGGAGGAATTGCCGAGGCGTGAGGCGGCGGCCATGGGGGAAGTTCACGGCAGAGATTCGGGACCCGAAGAGGAACGGTACGAGGACGTGGCTGGGAACTTATGAGAGAGAAGAGGATGCAGCTTTGGCTTATGATAGAGCTGCTTTCCAGATGCATGGTAGAAAAGCCAAGCTCAATTTTCCACACCTCATTGGATTGGAACAACCACTGCTGGAGCCGCGAAGAGTGGTGGCTGGACAGAAGTCACGGGCCTTGCTGGAACTTTCATTGCCGTCAAACATTACATCTGAGGATGATGGATCTCAAGGGACAAGTAGGAAGAAGAGCCTCACCGGACTATTGAACAAGTTAGCAACAAAAAGAAGCCACGTCAGATTGGGTTGCTATTATGAGTAA | 636 | 0.4843 | MIPSHSPFQSVQQYLIEDDPSFLDLMNDGFSFSLNLTLQEQGVSSSTGAVFSGENNDNNAVRPGGNDTGFVAREGNAPLRWRNCRGVRRRPWGKFTAEIRDPKRNGTRTWLGTYEREEDAALAYDRAAFQMHGRKAKLNFPHLIGLEQPLLEPRRVVAGQKSRALLELSLPSNITSEDDGSQGTSRKKSLTGLLNKLATKRSHVRLGCYYE | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr6g01190 | 211 | PANTHER | DNA-BINDING DOMAIN | 66 | 175 | IPR044808 | GO:0003700|GO:0009873 | |
Accr6g01190 | 211 | PRINTS | Ethylene responsive element binding protein signature | 123 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Accr6g01190 | 211 | PRINTS | Ethylene responsive element binding protein signature | 84 | 95 | IPR001471 | GO:0003700|GO:0006355 | |
Accr6g01190 | 211 | Pfam | AP2 domain | 85 | 133 | IPR001471 | GO:0003700|GO:0006355 | |
Accr6g01190 | 211 | SUPERFAMILY | DNA-binding domain | 84 | 142 | IPR016177 | GO:0003677 | |
Accr6g01190 | 211 | SMART | rav1_2 | 83 | 147 | IPR001471 | GO:0003700|GO:0006355 | |
Accr6g01190 | 211 | MobiDBLite | consensus disorder prediction | 46 | 73 | - | - | |
Accr6g01190 | 211 | MobiDBLite | consensus disorder prediction | 46 | 63 | - | - | |
Accr6g01190 | 211 | ProSiteProfiles | AP2/ERF domain profile. | 83 | 141 | IPR001471 | GO:0003700|GO:0006355 | |
Accr6g01190 | 211 | Gene3D | AP2/ERF domain | 84 | 142 | IPR036955 | GO:0003700|GO:0006355 | |
Accr6g01190 | 211 | CDD | AP2 | 85 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Accr6g01190 | 211 | FunFam | Ethylene-responsive transcription factor 2 | 83 | 142 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr6g01190 | Accr-Chr6 | 35195094 | 35195729 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr6g01190 | 85 | 177 | AP2-EREBP Transcription Factor Family | AT2G44840 | 64.516 | 1.79e-33 | 118 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Accr6g01190 | AP2 | 1.9e-11 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr6g01190 | K09286 | - | pcin:129296372 | 202.601 |