Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01189 ATGGAGGAATTACAAAGGCGTGAGGCGTCGGCCATGGGGACGTTCGCTGCTGAGATCCGGGACCCTAAAAGGAATGGCGCGAGAACGTGGTTAGGGACGTATGAGACGGAAGAGGACGCGGCTTTGGCTTATGATAGAGCTGCTTTTAAGTTAAGAGGTAGCAAAGCCAAGCTCAATTTTCCACACCTCGCTGGGTCAGAATCACTGCTGGAGCCGGCGAGAGTAGTGGGTCACAAGAAGCGGTGCCACTCGCCGGAACCTTCAATGCCATCAGGGTGTGCTTCTGAGGATGGTGGATCTCAAGGGTCAAGTAATAAGAAGAGCCAGACTGCTTGTCTATTGAATAAGTTAGCAACAAGTAGAAGCCAAGTCAGAAGCTTGAAATAA 387 0.509 MEELQRREASAMGTFAAEIRDPKRNGARTWLGTYETEEDAALAYDRAAFKLRGSKAKLNFPHLAGSESLLEPARVVGHKKRCHSPEPSMPSGCASEDGGSQGSSNKKSQTACLLNKLATSRSQVRSLK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01189 128 Gene3D AP2/ERF domain 5 62 IPR036955 GO:0003700|GO:0006355
Accr6g01189 128 PANTHER DNA-BINDING DOMAIN 12 107 IPR044808 GO:0003700|GO:0009873
Accr6g01189 128 MobiDBLite consensus disorder prediction 77 108 - -
Accr6g01189 128 CDD AP2 13 63 IPR001471 GO:0003700|GO:0006355
Accr6g01189 128 SUPERFAMILY DNA-binding domain 13 62 IPR016177 GO:0003677
Accr6g01189 128 ProSiteProfiles AP2/ERF domain profile. 1 61 IPR001471 GO:0003700|GO:0006355
Accr6g01189 128 MobiDBLite consensus disorder prediction 1 22 - -
Accr6g01189 128 SMART rav1_2 13 67 IPR001471 GO:0003700|GO:0006355
Accr6g01189 128 Pfam AP2 domain 13 53 IPR001471 GO:0003700|GO:0006355
Accr6g01189 128 MobiDBLite consensus disorder prediction 94 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01189 Accr-Chr6 35064649 35065035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01189 13 96 AP2-EREBP Transcription Factor Family AT2G44840 69.048 2.42e-33 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr6g01189 AP2 1e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01189 K09286 - pcin:129296372 152.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g01189 6 35064649 35065035 Accr6g01189 6 35064649 35065035 ECH