Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01183 ATGGAGAGGATTTCAGAGCCAAAGACACATCCTCGAGCGTTACCTGTTCTAGTCGAGTTATCAAATCCACACACAACCACAGCAAGGAGAGATGGTCAATTGACAAATTCTCAGGATATTTCGGGTATGCGTGGGATTTCAGTAAGAGAAGTCCATCAATTGTCAAAAGCACAGGATAGGTCAATCACTCGACTGGCCTCCATCAGAGAAGTGGCTCAGCTATCAAATGCCCGGCTAGTTTTGATTAGAGATGACATAGGATTTGATGGTCAAGGCTCTCATGAGCCTGTTCACTTTGCCCCTGCAAGAACATGGAAAGGAAAGGCATCTTTGCCAGAATCTGGAGAAATTATATCTGATGGTGATGCTTTAAAGGGGAGCTTTGATTTATTTGAGGAAGGAGGCCCGAGTTCATTTGCTGGTGCAAGTCACCCCCCTGAACCGGTTGATATGGATCTCATGAGAACAGTTTATGTGCCAATAAGTCAAAACAAATCTGAGGCTGGAGGCTTAATGAAGAGCTTTTCCGTGAAGGGTTCTTCCCTAGAAGATCTCTCAATTCGTGTTCCACCTAGAAAACCAAGCCCAGCTGTTCTTTCCCCAGCAGAAAGTCTAGTTGAAGAACAAAGTGATATGAGGAACTTGCCCTCTCCAGTTTTGGGTCCTCGGACGTCACAGAATACTGATCACTCTCTCCTTCCTCCAGATTCCGATGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGCGGAAATGTCAGTCCACTTAGTAGTATTGATAGTACTGGTGTTGTCACAGCAATGAGCATTGCTAATAGTTGTGCAAGTACATACCGGAGCGATGCACTCACTAGTGACGGCATGCTTAGTTTAGATAGGAACTTTGATAGTACTAAGGGGAGTGTGCGGGGTGATTCTCTAGAGAGTACGAAAACTAGTGCTAGTCAAGCGAGTGATAGCAGTGGGTTCAGTGATGACAGCAACTGGAGCAATGTTACTGGCAGCGCCAATAAGCCTCACAAAGGAAATGATCCTCGGTGGAAGGCTATCCTCGCCATCCGATCTCGGGATGGGATTTTGGGCATGAGTCATTTTAAGCTTCTCAAAAGACTTGGTTGTGGTGATATCGGTAGTGTATATCTCTCTGAGTTGAGTGCAACTCGGTGTTATTTTGCGATGAAAGTTATGGACAAGGCATCACTAGCAGCCAGAAAGAAGCTGACTAGGGCACAAACTGAAAGGGAGATATTGCAGCTGCTTGACCACCCATTTCTGCCAACTTTGTATACCCATTTTGAGACAGACAGATTTTCTTGTCTGGTGATGGAATACTGTCCTGGAGGTGACCTGCACACCTTAAGGCAACGTCAACCTGGGAAACATTTCTCAGAATATGCTGCTCGTTTCTATGCCGCAGAGGTTCTTTTAGCACTTGAATATCTCCACATGCTTGGAGTAGTGTATCGAGACCTTAAACCTGAAAATGTGCTGGTCCGAGATGATGGTCACATTATGCTTTCGGACTTTGATCTCTCCCTTAGATGTGCTGTTTCACCAACATTGATCAGAATGTCTGATGGTGACCCTAAACGAGGTGGTGGTGCATTTTGTGTTCAGCCTGCTTGTACTGAACCTTCATCGGTATGCATCCAGCCTGCCTGCTTCATCCCTCGGTTCTTCCCTCAGAAAAACAAGAAATCACAGAAGCCTAAAGCTGAGTCAGGGTTATCAGCCAACACGCTTCCTGAGCTTGTGGCCGAGCCCACCTCGGCTCGGTCCATGTCCTTTGTTGGAACCCACGAATACCTTGCTCCTGAGATCATCAAAGGAGAAGGTCATGGCAGTGCAGTGGATTGGTGGACATTTGGGATTTTCCTGCACGAGCTCTTATATGGTAAAACGCCTTTCAAAGGATCAGGGAACCGTGCTACATTGTTCAATGTTGTTGGCCAGCAGCTCAAATTTCCAGAGTCACCAGCCACTAGTTATGCTAGCCGGGATCTGATCCGAGGCTTGCTGGTGAAGGAACCACAGAACCGGCTAGGAGTAAAGAGAGGTGCAACTGAGATCAAGCAGCATCCCTTCTTTGAGGGTGTGAATTGGGCTTTGATTAGGTGCAGCACGCCCCCAGAAGTGCCCAGACCAGTCGAGAGCGAGATTCCCGGGCCCACAAGATTTGGACCGCCGGATACTGTTGGCAACAATAGCAAGAGGATGGTAGGTACTGATATGAAGTCTGGTGGGGGTAAATATCTAGACTTTGAGTTCTTCTAG 2277 0.4695 MERISEPKTHPRALPVLVELSNPHTTTARRDGQLTNSQDISGMRGISVREVHQLSKAQDRSITRLASIREVAQLSNARLVLIRDDIGFDGQGSHEPVHFAPARTWKGKASLPESGEIISDGDALKGSFDLFEEGGPSSFAGASHPPEPVDMDLMRTVYVPISQNKSEAGGLMKSFSVKGSSLEDLSIRVPPRKPSPAVLSPAESLVEEQSDMRNLPSPVLGPRTSQNTDHSLLPPDSDEKECVWDASLPPSGNVSPLSSIDSTGVVTAMSIANSCASTYRSDALTSDGMLSLDRNFDSTKGSVRGDSLESTKTSASQASDSSGFSDDSNWSNVTGSANKPHKGNDPRWKAILAIRSRDGILGMSHFKLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLAARKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRMSDGDPKRGGGAFCVQPACTEPSSVCIQPACFIPRFFPQKNKKSQKPKAESGLSANTLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQNRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVESEIPGPTRFGPPDTVGNNSKRMVGTDMKSGGGKYLDFEFF 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01183 758 ProSiteProfiles Protein kinase domain profile. 366 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g01183 758 MobiDBLite consensus disorder prediction 714 742 - -
Accr6g01183 758 MobiDBLite consensus disorder prediction 299 343 - -
Accr6g01183 758 Pfam Protein kinase domain 594 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g01183 758 Pfam Protein kinase domain 367 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g01183 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Accr6g01183 758 FunFam serine/threonine-protein kinase D6PK-like 450 517 - -
Accr6g01183 758 MobiDBLite consensus disorder prediction 299 339 - -
Accr6g01183 758 Gene3D Transferase(Phosphotransferase) domain 1 450 715 - -
Accr6g01183 758 Gene3D Phosphorylase Kinase; domain 1 366 449 - -
Accr6g01183 758 FunFam serine/threonine-protein kinase D6PK-like 592 715 - -
Accr6g01183 758 FunFam Serine/threonine-protein kinase D6PK-like 364 449 - -
Accr6g01183 758 SMART serkin_6 366 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g01183 758 CDD STKc_phototropin_like 364 716 - -
Accr6g01183 758 SUPERFAMILY Protein kinase-like (PK-like) 348 724 IPR011009 -
Accr6g01183 758 PANTHER FLIPPASE KINASE 1-RELATED 144 719 - -
Accr6g01183 758 MobiDBLite consensus disorder prediction 186 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01183 Accr-Chr6 34937793 34940841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01183 1 758 AGC Kinase Gene Family AT2G44830 66.794 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Accr6g01183 Pkinase 1.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01183 - - gmx:100800019 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g01183 6 34937793 34940841 Accr6g01183 6 34937793 34940841 ECH