Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01130 ATGGCTTCACCTTCTTCGCCGGTGGATTCTACGCCTCCTGATCCGCCTTCCGCTGTGCCTCTTCCCCTCCCGGCGCCACCGTCATCTCGCCGTCTTCCGCCGCCGTGTTGGTCCCACGATGAGACTGTGGCTCTCATCGACGGGTATCGTGACAAGTGGTATTCCCTTGGTCGGGGTAATCTGAAGGCTACTCACTGGCAAGGGGTTGCGGATGCGGTTACGAGTCGTTGTCCGAATGCGTCTCCGCCTAAGACCGCCATCCAGTGCCGCCACAAGATGGAGAAGCTCCGAAAGCGATACCGCACCGAGATCCAGCGTGCCCGGTCCATGCCCGTTGCCCGATTCAATTCATCCTGGGTCCATTTCAAGCGTATGGATTCTATGGAAAAAGGTCCTTCCCCGGTTAAAGCTGAGAACAATTCCGATAGTCCTGATGAGATTGACCGCGACGATGACGATGACGAACAAGATTTGTATGAGGAATTTAAGAATGCTGGTGCCGGATCGAACACCAGGAGCTTGAATAAATTGTACAGGAACGGAATCGGTGGTGGTTCCGATGGCGGCGGCATGGGTGGAGCCGGATTTCGGATTAGGATTCCGACTGGGGTGAGTATAGCACAAGCGGGGACTAAATTTTACGGGAAGCTTGCTGATCAGAAATTTAACTCGAATTCGAACTCAGCCGCGCCAAACTCTAATTGCAGCCCAAATTACAGCACAAGGATTTTGAAAGAGAGAAGCGGATTGGGGAAGAGGGAGAAGCAGAGGGATCCAGTGGGAGAGATGGTGACTGCAATTAAGGTTTTAGGAGATGGATTTGTGAGGATGGAGCAAATGAAGATGGACATGGCAAGAGAGATTGAAACTATGAGGCTGGACATGGAAATGAAACGTACTGAGATGATTTTGGAGTCTCAACAACGGATCGTTGAGGCATTCGCTAAGGCAGTTTCAGAGAAGAAGAAGAACAAGGCTAAGAGAATGCCATCACCTTCAGAAGAACCATAG 1011 0.5143 MASPSSPVDSTPPDPPSAVPLPLPAPPSSRRLPPPCWSHDETVALIDGYRDKWYSLGRGNLKATHWQGVADAVTSRCPNASPPKTAIQCRHKMEKLRKRYRTEIQRARSMPVARFNSSWVHFKRMDSMEKGPSPVKAENNSDSPDEIDRDDDDDEQDLYEEFKNAGAGSNTRSLNKLYRNGIGGGSDGGGMGGAGFRIRIPTGVSIAQAGTKFYGKLADQKFNSNSNSAAPNSNCSPNYSTRILKERSGLGKREKQRDPVGEMVTAIKVLGDGFVRMEQMKMDMAREIETMRLDMEMKRTEMILESQQRIVEAFAKAVSEKKKNKAKRMPSPSEEP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01130 336 SMART 118neu2 44 133 IPR006578 -
Accr6g01130 336 Gene3D - 37 102 - -
Accr6g01130 336 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 321 IPR044823 -
Accr6g01130 336 MobiDBLite consensus disorder prediction 126 153 - -
Accr6g01130 336 Coils Coil 90 110 - -
Accr6g01130 336 MobiDBLite consensus disorder prediction 1 34 - -
Accr6g01130 336 MobiDBLite consensus disorder prediction 8 33 - -
Accr6g01130 336 Pfam Myb/SANT-like DNA-binding domain 35 128 IPR044822 -
Accr6g01130 336 FunFam Trihelix transcription factor ASIL2 37 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01130 Accr-Chr6 31962889 31963899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01130 36 128 Trihelix Transcription Factor Family AT3G14180 37.634 3.47e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr6g01130 Myb_DNA-bind_4 2.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01130 - - qsa:O6P43_017256 461.84