Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01089 ATGTCCTTCAATCAATCAAGGTCCGATAAGAGCGACAGTCAGAACCGTAAATCCGGGCGATCAGGGAGCTTCAATCAGCAGAGAGGTTCCTCAGGCGCGTACGTTAAGGGCGGTGGCGGCGGGCCCTCGCCTTCTCCCGCAATCACTTCGGGTGCCTTACAGTCCTCTAATCGGAGTTATAAGAGGTCCAATAATACACATGGCGGGCCATCTAGGGTAAACCCTCCCCCTGTGAATTCAGCCGAGTCTAATGGTGCTTCTACAGTCCGGGCCATACCAAATGGTGCCCATACACAACAATCACCTGGAGCATCTGATGCGCCATTTACAAATGCAACTGCCAAATCATCTGAATCCTCATCTGTACCGAAGAGCACCAGAGTTGTTCCGAAAGCTCCAACTCCTCGACCTACCGCCGTGAATTATGATGCAGCAGCTCCTACAACCCCTGCCAAGGTCCCTGAAGATTCATCCAAGCCATTTGCTTTCCAGTTTGGGTCCATTAGTCCCGGTTTCATGAATGGGATTTCAATTCCTGCTCGCACAAGCTCAGCTCCTCCGAATTTGGATGAGCAGAAAAGAGATCAGGCTCGTCATGGTTCTTTAAGACCTGTGCCTTCAGTGCCAACACCTCCAAAGCAGCTGCCACCAAGGAATGATGGTGGTGTTACTGACCAAACTAATGCTGGGGAGGTTCATTCAGTGAACAAAGTGAAAAAGGAGGAGCAGGCGTCATCTTTGCCCCCATCAAGCCAGATGCAAAAGCCATCCGTTGCCATGACTGGGATGATGGCGATGCCATATCATCACCAATCACAGGCACCTGTACAGTTTAGTGGTCCTAACCCACAGATTCAATCTCAGGGAATGCCAGCAGCATCTCTTCAGATGCCTATGCCTATGCCTTTGACAATGGGAAATGTTGCACAAGTACCACAAGTTTTTGTTCATCATGGTCTTCAATCTCTTCCAATTCATCCTCCGGCAATTATGCATCAAGGCCAGTTCACTTCTCAAATGGTTCATCAGATGCCCCATCAGTTAGGTAGTGTGGGTATTAACATGAACTCACAATATTCCCAACAGCAAGGTGGAAAATTTGCTATTCCTCGCAAAGCCCCTACTGTCAAGATTACTCATCCTGAGACACATGAAGAGCTGAGGCTGCTGGACTTTGACAAAAAGGCAGATTCACATTCAGAAGGCATGACCTCAGGTGCTAGGTCTTATCCTAATGTTCCTTCTCAGTCTCAACCTGTTCAGTCATTTGCTGCTTCGCATCCCCTCAACTATTTTCCATCCAGCACTTACAGTAGTAGCTCTCTTTTTTACCCACCTAGTTCTGGTCCTCTATCAAACAGCCATATAACTCCTAATTCTCAGCAACCAAGATTTAGTTATCCAGTGAATCAGGGCCCCCCAATTGCAGGTCTTAACAATCAATTATCTATTGGTTCCTTGCCTGTTAATAAAAATGGTGCTTCTGTTCCTGGCCTCAGTGAAACACCAAATCTGGAACATTCTCCTGATGTGCAGAAGGTGATGTCATCAGGTACATCTGGAGTAACTCATGCTAGTATCAAACCAAGTGGCAGCGCTGGTAGTGTGGACTCGACAATCACCAATTCTAGTATTTCTGTTGTTAAAACAAGTGAATCTCCCAGCTATATAGGGTCATCTAATTACATTGTTTCCACTGTGTCTCATAAAGGCCCTGATAATTTTTTAGAGACCTCTTCACAGCAGTCTAAGTCATCCAGTGATTCTTTTGTTTCAAGGCCAGAGCCAAAACAACCTGCTGCGGGATCTGCTGAGAAGCTTGTATCTACTCCCTTGATGCCTTCTTCTGCTGCTGTGAGTGAGAACTGTGTCTCGGTTGTGCCCAACAATGAAGGGAGAAGGAAGGAATCTCTTAGCAGGTCAAACTCTTTGAAAGATAATCAGAAGAAAACAGGGAAGAGAGGCCAACCGCAGTATCAGCCACAGGTTCCTGTACAATCTCCTACAGTGGTTAATGTCCCTTCTAAAGCTGGAGATAGTGTTACGCTTGATCATGAAGTTTCTGATACTGTAGAAAATAAAACAAAGGTTTGTGTAGTAATAACCAGTGAAGATAACTCTAGCACAGCAGAGGCATTATCAGCTCCAGTTAGCAGTGATATTGGTCCTAATGCTAATGAAATGAACATTGGCCCTCCTGCAGAAGGTTCTGTCGGCATTTCAGCTGAAGGAGTTGGTACCTTAGCTGTTGATAGTTTGGATAACCATGAGCATGATAAACTAGAGGAATCATCACAACAAGATAAGCTTTCAAAGATGAATATACTTGAGGTAGGTGATAAAAATGAAAGATTTTCTGAAGTACCTAAACAAAAAAGTGATGACATTGGAAATAACTTTAAACAAATAGAACAAGATGCGGCCCAGGAATTGCAAGATGTACAACAAAGATTGGAATCGCAGGCTGAATCTACAAATTGTAGATCAGAATGCGACAAGAAGGGTGATAATTTAGATGTGCCTACCTCAAATGATTTGGATTCTAGAGATATCTCTTTAAATAGAAATGATAGTACAGTTAGCAATGAATCTATTTCTGCAAATTCTGCCACTTCTGATAAGAATTCTAGTGATCTCCCAGAAGCCACTTCAAAACATAGCAAGGATTTGCCAGAGAATGTGGACAGTGACTCAGTGTCCCTTTCAATGTCAGTGAACAAGGATAGACCTATTTTGGAGCCAAATAAGGTGAAAACTACAACAAAAGGAAAGAAGAAAAGAAGGGAGTTTCTTCAGAAAGCAGATGCTGCTGGATCAACTTCAGATCTTTATAATGCGTACAAGAGACCTGAGGAAAAGAAAGAAGTAGTTGTAAGTTCAGAGAGCAAAGAAAGTACTTCATCTGGAAGTTTAAAGCAGTTGCCTGATGAGGCTGCTCAATCAGATGCTATGGCAACTGAGAAAGGTGGTCATGATAAAGCTGAGCCTGATGACTGGGAGGATGCTGCTGACATGTCTTCCCCTAAATTGGAAGTTGTGGATAAAAAACAACTGGTTAGCGATGGAAGTGAAATTACTGCTAAAAAATACTCTAGAGATTTCCTTTTGAAATTTGAAGAGCAGTGCATTGATCTTCCTGAGGGTTTTGAAATTACAGCAGACATTGCTGAGGCTTTGATGAATTCTAATATTACTGGTTCTCATGTTGAACGTGATTTACATCCTAGTCCAGGAAGAATTATGGATAGGTCCGGTGGGATGCCTAGAATGGACCGCCGCGGGTCTGGGCATTTTGAAGAAGACCGGTGGAGTAAAGTCCCTGGACCTTTAAATTCTGGACGTGACATGCGTATGGATGGTTTTGGAGGTAATACAGGATTTCGACATGGCCAAGGAGGCAATTTTGGTGTTTTGAGGAACCCACGTGCTCAGACGCCTCTGCAATATGCTGGAGGCATTCTTTCTGGACCAATGCAATCAATGGGAAATCAGGGTGTTATGCAGAAGAATAGCCCTGATGGTGAGAGGTGGCAACGAGCAACTAACTTCCAGCAGAGGGGTTTAATTCCTTCTCCTCAGACCCCTCTACAAATGATGCATAAAGCTGAGAAAAAGTATGAGGTCGGTAAGGTGACAGATGAGGAACAGGCAAAGCAGAGACAGTTGAAAGCCATTTTGAACAAGTTAACTCCTCAGAATTTTGAGAGACTTTTTGAGCAGGTAAAAGCTGTTAATATTGACAATGCTGTCACCCTTACTGGTGTAATCTCTCAAATATTTGAGAAGGCTCTAATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGCTCACACCTAGCTACTGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAACAAGGATGATGAGGGTGAGGTCAAGCAGTCTGATGAAGAGAGGGAAGTGAAACGAGTTAAGGCCAGAAGACGCATGTTAGGTAATATACGGTTGATTGGAGAGTTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGATCGTATCAGGATCCTGATGAGGAAGACATTGAAGCTTTGTGCAAGCTGATGAGTACAATTGGGGAGATGATTGATCATCCCAAAGCCAAGGAACACATGGATGCATATTTTGAAAGGATGAAATTGTTATCGAACAACATGAATCTATCTTCTCGAGTTAGATTCATGTTGAGGGATGCCATTGATCTTAGAAAGAACAAATGGCAACAGAAGCGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTGCCCAAGAGAGGCATGGCCATACCGGGAGGCTAGGACGTGGTCCAGGCAATGCATCTTCAAGAAGGATGGCTATGGAATTTAGTCCAAGAGGGTCATCTGTGTTATCTCCTCCTAACACCCCTATGGGGACGCGTGGGCTTTCTGCTCAAGGTCGCAGTGGTGGCTCTCAGGATGTTCGTCATGATGATAGACCATATGATGCTAGAAATTTGTCTGTTCCTTTACCTCAAAGACCTTTAGGTGATGATTCTATAACCTTGGGTCCACAAGGTGGTCTTGCACGAGGAATGTCCTTTAGGGGGCCTGCTGTAATTCCAAGTTCTCCTGCTCCTGATGGGCTCCCAGGTGCAGATTCTCGAAGAATGACGTCTGGCCTTAATGGTTATAGCACTTCGTCAGAGCGTGCTATGTACAGCGGTAGAGAAGATCAAATGCCAAGATATGCTTCAGATAGATCTGCTGGTCCATCTTCTCATGACCAATCAGCTGTTCAGGAGCGTAATATTAATTATGGCAACAGGGAGTTGAGAAATGCTGACAGGAGTCTTGAGAGACCTTTTGCAACTTCACCTACTGGAGTGCAAGGATCTGCAGTCTCCAATAATATTCCGTCAGGGAAGGTTTGGCCAGAAGAACGACTGCAGGACATGTCCATGGCAGCAATTAAAGAATACTATAGTGCTAGAGATGTAAAAGAAGTTGCTCTGTGTGTCAAAGATCTAGACTCTCCAAGCTATCATCCTTTGATGATTTCTCTATGGGTCACAGACTCATTTGAGAGAAAGGACACGGAACGAGGTCTTTTGGCCAAATTACTAGTGAGCCTTACAAAGTCTCAGGATGGCCAAATTACCTTGAGTCAGGCTCAGCTTATCCAAGGGTTTGAATCTGTTCTAAGTGGTCTGGAAGATGCCGTTAATGATGCCCCCAGAGCTCCAGAATTTCTGGGCCGAATTTTTGCCACAGTTGTGACGGAAAATGTTATCTCTTTGAAAGATATCTGCCAACTATTATGTGAAGCTGGGGAGGAACCTGGTCTACTCTTAGAAATTGGACTCGCAGGCGATGTTCTGGGAAGCACCTTCGAGGCCATAAAAATGGAGAAGGGGGATGCTGTTTTGAGTGAGATACGATCAAACTCCAACATGAGGCTGGATAATTTCCGGCCGCCCAATGCTGCTGTATCAAGAAAGTTAGAGGCATTTATTTAG 5595 0.4411 MSFNQSRSDKSDSQNRKSGRSGSFNQQRGSSGAYVKGGGGGPSPSPAITSGALQSSNRSYKRSNNTHGGPSRVNPPPVNSAESNGASTVRAIPNGAHTQQSPGASDAPFTNATAKSSESSSVPKSTRVVPKAPTPRPTAVNYDAAAPTTPAKVPEDSSKPFAFQFGSISPGFMNGISIPARTSSAPPNLDEQKRDQARHGSLRPVPSVPTPPKQLPPRNDGGVTDQTNAGEVHSVNKVKKEEQASSLPPSSQMQKPSVAMTGMMAMPYHHQSQAPVQFSGPNPQIQSQGMPAASLQMPMPMPLTMGNVAQVPQVFVHHGLQSLPIHPPAIMHQGQFTSQMVHQMPHQLGSVGINMNSQYSQQQGGKFAIPRKAPTVKITHPETHEELRLLDFDKKADSHSEGMTSGARSYPNVPSQSQPVQSFAASHPLNYFPSSTYSSSSLFYPPSSGPLSNSHITPNSQQPRFSYPVNQGPPIAGLNNQLSIGSLPVNKNGASVPGLSETPNLEHSPDVQKVMSSGTSGVTHASIKPSGSAGSVDSTITNSSISVVKTSESPSYIGSSNYIVSTVSHKGPDNFLETSSQQSKSSSDSFVSRPEPKQPAAGSAEKLVSTPLMPSSAAVSENCVSVVPNNEGRRKESLSRSNSLKDNQKKTGKRGQPQYQPQVPVQSPTVVNVPSKAGDSVTLDHEVSDTVENKTKVCVVITSEDNSSTAEALSAPVSSDIGPNANEMNIGPPAEGSVGISAEGVGTLAVDSLDNHEHDKLEESSQQDKLSKMNILEVGDKNERFSEVPKQKSDDIGNNFKQIEQDAAQELQDVQQRLESQAESTNCRSECDKKGDNLDVPTSNDLDSRDISLNRNDSTVSNESISANSATSDKNSSDLPEATSKHSKDLPENVDSDSVSLSMSVNKDRPILEPNKVKTTTKGKKKRREFLQKADAAGSTSDLYNAYKRPEEKKEVVVSSESKESTSSGSLKQLPDEAAQSDAMATEKGGHDKAEPDDWEDAADMSSPKLEVVDKKQLVSDGSEITAKKYSRDFLLKFEEQCIDLPEGFEITADIAEALMNSNITGSHVERDLHPSPGRIMDRSGGMPRMDRRGSGHFEEDRWSKVPGPLNSGRDMRMDGFGGNTGFRHGQGGNFGVLRNPRAQTPLQYAGGILSGPMQSMGNQGVMQKNSPDGERWQRATNFQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFERLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLATELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKDDEGEVKQSDEEREVKRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGSYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLRDAIDLRKNKWQQKRKVEGPKKIEEVHRDAAQERHGHTGRLGRGPGNASSRRMAMEFSPRGSSVLSPPNTPMGTRGLSAQGRSGGSQDVRHDDRPYDARNLSVPLPQRPLGDDSITLGPQGGLARGMSFRGPAVIPSSPAPDGLPGADSRRMTSGLNGYSTSSERAMYSGREDQMPRYASDRSAGPSSHDQSAVQERNINYGNRELRNADRSLERPFATSPTGVQGSAVSNNIPSGKVWPEERLQDMSMAAIKEYYSARDVKEVALCVKDLDSPSYHPLMISLWVTDSFERKDTERGLLAKLLVSLTKSQDGQITLSQAQLIQGFESVLSGLEDAVNDAPRAPEFLGRIFATVVTENVISLKDICQLLCEAGEEPGLLLEIGLAGDVLGSTFEAIKMEKGDAVLSEIRSNSNMRLDNFRPPNAAVSRKLEAFI 1864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01089 1864 MobiDBLite consensus disorder prediction 573 607 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 1443 1665 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 1584 1599 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 946 960 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 774 791 - -
Accr6g01089 1864 Gene3D - 1668 1864 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 792 825 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 626 671 - -
Accr6g01089 1864 Pfam MA3 domain 1681 1790 IPR003891 -
Accr6g01089 1864 Coils Coil 1301 1321 - -
Accr6g01089 1864 Gene3D - 1219 1454 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 826 840 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 573 593 - -
Accr6g01089 1864 FunFam Eukaryotic translation initiation factor 4G 1668 1863 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 1085 1104 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 47 127 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 176 190 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 879 893 - -
Accr6g01089 1864 SUPERFAMILY ARM repeat 1670 1861 IPR016024 -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 493 539 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 1443 1471 - -
Accr6g01089 1864 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 358 1864 IPR045208 GO:0003743
Accr6g01089 1864 MobiDBLite consensus disorder prediction 633 652 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 704 725 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 174 256 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 1493 1516 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 1068 1114 - -
Accr6g01089 1864 SUPERFAMILY ARM repeat 1213 1443 IPR016024 -
Accr6g01089 1864 SMART ma3_7 1675 1791 IPR003891 -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 1649 1665 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 961 975 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 752 767 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 986 1008 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 841 878 - -
Accr6g01089 1864 ProSiteProfiles MI domain profile. 1674 1800 IPR003891 -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 653 671 - -
Accr6g01089 1864 FunFam Eukaryotic translation initiation factor 4G 1219 1454 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 1615 1633 - -
Accr6g01089 1864 Pfam MIF4G domain 1219 1441 IPR003890 GO:0003723|GO:0005515
Accr6g01089 1864 MobiDBLite consensus disorder prediction 17 32 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 241 256 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 1310 1334 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 402 421 - -
Accr6g01089 1864 Coils Coil 801 828 - -
Accr6g01089 1864 SMART if4_15 1219 1441 IPR003890 GO:0003723|GO:0005515
Accr6g01089 1864 MobiDBLite consensus disorder prediction 1 158 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 396 421 - -
Accr6g01089 1864 MobiDBLite consensus disorder prediction 704 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01089 Accr-Chr6 30733205 30740813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01089 1 676 Eukaryotic Initiation Factors Gene Family AT3G60240 35.078 3.26e-67 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01089 K03260 - gmx:100796636 2105.1