Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01086 ATGTCCTTCAATCAATCAAGGTCCGATAAGAGCGACAGTCAGAACCGTAAATCCGGGCGATCAGGGAGCTTCAATCAGCAGAGAGGTTCCTCAGGCGCGTACGTTAAGGGCGGTGGCGGCGGGCCCTCGCCTTCTCCCGCAATCACTTCGGGTGCCTTACAGTCCTCTAATCGGAGTTATAAGAGGTCCAATAATACACATGGCGGGCCATCTAGGGTAAACCCTCCCCCTGTGAATTCAGCCGAGTCTAATGGTGCTTCTACAGTCCGGGCCATACCAAATGGTGCCCATACACAACAATCACCTGGAGCATCTGATGCGCCATTTACAAATGCAACTGCCAAATCATCTGAATCCTCATCTGTACCGAAGAGCACCAGAGTTGTTCCGAAAGCTCCAACTCCTCGACCTACCGCCGTGAATTATGATGCAGCAGCTCCTACAACCCCTGCCAAGGTCCCTGAAGATTCATCCAAGCCATTTGCTTTCCAGTTTGGGTCCATTAGTCCCGGTTTCATGAATGGGATTTCAATTCCTGCTCGCACAAGCTCAGCTCCTCCGAATTTGGATGAGCAGAAAAGAGATCAGGCTCGTCATGGTTCTTTAAGACCTGTGCCTTCAGTGCCAACACCTCCAAAGCAGCTGCCACCAAGGAATGATGGTGGTGTTACTGACCAAACTAATGCTGGGGAGGTTCATTCAGTGAACAAAGTGAAAAAGGAGGAGCAGGCGTCATCTTTGCCCCCATCAAGCCAGATGCAAAAGCCATCCGTTGCCATGACTGGGATGATGGCGATGCCATATCATCACCAATCACAGGCACCTGTACAGTTTAGTGGTCCTAACCCACAGATTCAATCTCAGGGAATGCCAGCAGCATCTCTTCAGATGCCTATGCCTATGCCTTTGACAATGGGAAATGTTGCACAAGTACCACAAGTTTTTGTTCATCATGGTCTTCAATCTCTTCCAATTCATCCTCCGGCAATTATGCATCAAGGCCAGTTCACTTCTCAAATGGTTCATCAGATGCCCCATCAGTTAGGTAGTGTGGGTATTAACATGAACTCACAATATTCCCAACAGCAAGGTGGAAAATTTGCTATTCCTCGCAAAGCCCCTACTGTCAAGATTACTCATCCTGAGACACATGAAGAGCTGAGGCTGCTGGACTTTGACAAAAAGGCAGATTCACATTCAGAAGGCATGACCTCAGGTGCTAGGTCTTATCCTAATGTTCCTTCTCAGTCTCAACCTGTTCAGTCATTTGCTGCTTCGCATCCCCTCAACTATTTTCCATCCAGCACTTACAGTAGTAGCTCTCTTTTTTACCCACCTAGTTCTGGTCCTCTATCAAACAGCCATATAACTCCTAATTCTCAGCAACCAAGATTTAGTTATCCAGTGAATCAGGGCCCCCCAATTGCAGGTCTTAACAATCAATTATCTATTGGTTCCTTGCCTGTTAATAAAAATGGTGCTTCTGTTCCTGGCCTCAGTGAAACACCAAATCTGGAACATTCTCCTGATGTGCAGAAGGTGATGTCATCAGGTACATCTGGAGTAACTCATGCTAGTATCAAACCAAGTGGCAGCGCTGGTAGTGTGGACTCGACAATCACCAATTCTAGTATTTCTGTTGTTAAAACAAGTGAATCTCCCAGCTATATAGGGTCATCTAATTACATTGTTTCCACTGTGTCTCATAAAGGCCCTGATAATTTTTTAGAGACCTCTTCACAGCAGTCTAAGTCATCCAGTGATTCTTTTGTTTCAAGGCCAGAGCCAAAACAACCTGCTGCGGGATCTGCTGAGAAGCTTGTATCTACTCCCTTGATGCCTTCTTCTGCTGCTGTGAGTGAGAACTGTGTCTCGGTTGTGCCCAACAATGAAGGGAGAAGGAAGGAATCTCTTAGCAGGTCAAACTCTTTGAAAGATAATCAGAAGAAAACAGGGAAGAGAGGCCAACCGCAGTATCAGCCACAGGTTCCTGTACAATCTCCTACAGTGGTTAATGTCCCTTCTAAAGCTGGAGATAGTGTTACGCTTGATCATGAAGTTTCTGATACTGTAGAAAATAAAACAAAGGTTTGTGTAGTAATAACCAGTGAAGATAACTCTAGCACAGCAGAGGCATTATCAGCTCCAGTTAGCAGTGATATTGGTCCTAATGCTAATGAAATGAACATTGGCCCTCCTGCAGAAGGTTCTGTCGGCATTTCAGCTGAAGGAGTTGGTACCTTAGCTGTTGATAGTTTGGATAACCATGAGCATGATAAACTAGAGGAATCATCACAACAAGATAAGCTTTCAAAGATGAATATACTTGAGGTAGGTGATAAAAATGAAAGATTTTCTGAAGTACCTAAACAAAAAAGTGATGACATTGGAAATAACTTTAAACAAATAGAACAAGATGCGGCCCAGGAATTGCAAGATGTACAACAAAGATTGGAATCGCAGGCTGAATCTACAAATTGTAGATCAGAATGCGACAAGAAGGGTGATAATTTAGATGTGCCTACCTCAAATGATTTGGATTCTAGAGATATCTCTTTAAATAGAAATGATAGTACAGTTAGCAATGAATCTATTTCTGCAAATTCTGCCACTTCTGATAAGAATTCTAGTGATCTCCCAGAAGCCACTTCAAAACATAGCAAGGATTTGCCAGAGAATGTGGACAGTGACTCAGTGTCCCTTTCAATGTCAGTGAACAAGGATAGACCTATTTTGGAGCCAAATAAGGTGAAAACTACAACAAAAGGAAAGAAGAAAAGAAGGGAGTTTCTTCAGAAAGCAGATGCTGCTGGATCAACTTCAGATCTTTATAATGCGTACAAGAGACCTGAGGAAAAGAAAGAAGTAGTTGTAAGTTCAGAGAGCAAAGAAAGTACTTCATCTGGAAGTTTAAAGCAGTTGCCTGATGAGGCTGCTCAATCAGATGCTATGGCAACTGAGAAAGGTGGTCATGATAAAGCTGAGCCTGATGACTGGGAGGATGCTGCTGACATGTCTTCCCCTAAATTGGAAGTTGTGGATAAAAAACAACTGGTTAGCGATGGAAGTGAAATTACTGCTAAAAAATACTCTAGAGATTTCCTTTTGAAATTTGAAGAGCAGTGCATTGATCTTCCTGAGGGTTTTGAAATTACAGCAGACATTGCTGAGGCTTTGATGAATTCTAATATTACTGGTTCTCATGTTGAACGTGATTTACATCCTAGTCCAGGAAGAATTATGGATAGGTCCGGTGGGATGCCTAGAATGGACCGCCGCGGGTCTGGGCATTTTGAAGAAGACCGGTGGAGTAAAGTCCCTGGACCTTTAAATTCTGGACGTGACATGCGTATGGATGGTTTTGGAGGTAATACAGGATTTCGACATGGCCAAGGAGGCAATTTTGGTGTTTTGAGGAACCCACGTGCTCAGACGCCTCTGCAATATGCTGGAGGCATTCTTTCTGGACCAATGCAATCAATGGGAAATCAGGGTGTTATGCAGAAGAATAGCCCTGATGGTGAGAGGTGGCAACGAGCAACTAACTTCCAGCAGAGGGGTTTAATTCCTTCTCCTCAGACCCCTCTACAAATGATGCATAAAGCTGAGAAAAAGTATGAGGTCGGTAAGGTGACAGATGAGGAACAGGCAAAGCAGAGACAGTTGAAAGCCATTTTGAACAAGTTAACTCCTCAGAATTTTGAGAGACTTTTTGAGCAGGTAAAAGCTGTTAATATTGACAATGCTGTCACCCTTACTGGTGTAATCTCTCAAATATTTGAGAAGGCTCTAATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGCTCACACCTAGCTACTGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAACAAGGATGATGAGGGTGAGGTCAAGCAGTCTGATGAAGAGAGGGAAGTGAAACGAGTTAAGGCCAGAAGACGCATGTTAGGTAATATACGGTTGATTGGAGAGTTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGATCGTATCAGGATCCTGATGAGGAAGACATTGAAGCTTTGTGCAAGCTGATGAGTACAATTGGGGAGATGATTGATCATCCCAAAGCCAAGGAACACATGGATGCATATTTTGAAAGGATGAAATTGTTATCGAACAACATGAATCTATCTTCTCGAGTTAGATTCATGTTGAGGGATGCCATTGATCTTAGAAAGAACAAATGGCAACAGAAGCGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTGCCCAAGAGAGGCATGGCCATACCGGGAGGCTAGGACGTGGTCCAGGCAATGCATCTTCAAGAAGGATGGCTATGGAATTTAGTCCAAGAGGGTCATCTGTGTTATCTCCTCCTAACACCCCTATGGGGACGCGTGGGCTTTCTGCTCAAGGTCGCAGTGGTGGCTCTCAGGATGTTCGCCAAGATGATAGACCATCATATGAGGCTAGAAATTTGTCAGTTCCTTTGCCTCAAAGGCCTTTAGGTAGTGATTCTATAACTTTGGGACCACAAGGAGGTCTTGCAAGAGGAATGTCCTTCAGAGGGCCTGCTGTTATTCCAAGTCCTGGCCTTAATGGTTATAGCAATTCATCTGAGCGTGTCCTTTACAGCTCTAGAGAAGATCAAATGCCAAGATATGCTACAGATAGATTTGCTGGTCCAACTGCTCATGAACAATCAGCTGTTCAGCATCGTAATATAAATTATGGTAATAGAGAGTTGAGAAATGCTGAGCGGAGTCTTGAGAGACCTGTTGCAACTTCACCCCCTGGAGTGCAAGGATCTGCAGTCTCTGGGAACACTCCTTCAGAGAAGGTCTGGCCAGAAGAACGACTGCGGGAAATGTCCATGGCAGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTAGCGCTATGCGTCAGTGATCTAAAGTCTCCAAGCTATCATCCTTCGATGATTTCTTTATGGGTCACAGACTCCTTTGAGAGAAAGGACTTGGAAAGAGATCTTTTGGCTAAATTACTAGTGACCCTCACAAAGTCTTATGATGGCACATTGAGTCAGGCTCAGCTTATCCAAGGGTTTAAATCTGTTCTAAGTGGTCTGGAAGATGCCGTTAATGATGCCCCCAGAGCCCCGGAATTTCTGGGTCGAATTTTTGCCAGGGTTGTGACGGAAAATGTTGTCTTTTTGGAAGAGATTGGCCAACTATTACATGAAGGTGGCGAGGAGCCAGGTCAACTCCTAGAAATTGGACTCGCAGCCGATGTTCTTGGAAACACATTGGAAGCAATAAAAATGGAGAATGGGGATGCTATATTGAGTGAGATACGCTCAAACTCTAACCTGAGGCTGGAGACTTTCCGGCCACCCAAACCTGTTATATCAAGAAAGTTAGAAAATTTTATTTAG 5544 0.4392 MSFNQSRSDKSDSQNRKSGRSGSFNQQRGSSGAYVKGGGGGPSPSPAITSGALQSSNRSYKRSNNTHGGPSRVNPPPVNSAESNGASTVRAIPNGAHTQQSPGASDAPFTNATAKSSESSSVPKSTRVVPKAPTPRPTAVNYDAAAPTTPAKVPEDSSKPFAFQFGSISPGFMNGISIPARTSSAPPNLDEQKRDQARHGSLRPVPSVPTPPKQLPPRNDGGVTDQTNAGEVHSVNKVKKEEQASSLPPSSQMQKPSVAMTGMMAMPYHHQSQAPVQFSGPNPQIQSQGMPAASLQMPMPMPLTMGNVAQVPQVFVHHGLQSLPIHPPAIMHQGQFTSQMVHQMPHQLGSVGINMNSQYSQQQGGKFAIPRKAPTVKITHPETHEELRLLDFDKKADSHSEGMTSGARSYPNVPSQSQPVQSFAASHPLNYFPSSTYSSSSLFYPPSSGPLSNSHITPNSQQPRFSYPVNQGPPIAGLNNQLSIGSLPVNKNGASVPGLSETPNLEHSPDVQKVMSSGTSGVTHASIKPSGSAGSVDSTITNSSISVVKTSESPSYIGSSNYIVSTVSHKGPDNFLETSSQQSKSSSDSFVSRPEPKQPAAGSAEKLVSTPLMPSSAAVSENCVSVVPNNEGRRKESLSRSNSLKDNQKKTGKRGQPQYQPQVPVQSPTVVNVPSKAGDSVTLDHEVSDTVENKTKVCVVITSEDNSSTAEALSAPVSSDIGPNANEMNIGPPAEGSVGISAEGVGTLAVDSLDNHEHDKLEESSQQDKLSKMNILEVGDKNERFSEVPKQKSDDIGNNFKQIEQDAAQELQDVQQRLESQAESTNCRSECDKKGDNLDVPTSNDLDSRDISLNRNDSTVSNESISANSATSDKNSSDLPEATSKHSKDLPENVDSDSVSLSMSVNKDRPILEPNKVKTTTKGKKKRREFLQKADAAGSTSDLYNAYKRPEEKKEVVVSSESKESTSSGSLKQLPDEAAQSDAMATEKGGHDKAEPDDWEDAADMSSPKLEVVDKKQLVSDGSEITAKKYSRDFLLKFEEQCIDLPEGFEITADIAEALMNSNITGSHVERDLHPSPGRIMDRSGGMPRMDRRGSGHFEEDRWSKVPGPLNSGRDMRMDGFGGNTGFRHGQGGNFGVLRNPRAQTPLQYAGGILSGPMQSMGNQGVMQKNSPDGERWQRATNFQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFERLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLATELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKDDEGEVKQSDEEREVKRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGSYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLRDAIDLRKNKWQQKRKVEGPKKIEEVHRDAAQERHGHTGRLGRGPGNASSRRMAMEFSPRGSSVLSPPNTPMGTRGLSAQGRSGGSQDVRQDDRPSYEARNLSVPLPQRPLGSDSITLGPQGGLARGMSFRGPAVIPSPGLNGYSNSSERVLYSSREDQMPRYATDRFAGPTAHEQSAVQHRNINYGNRELRNAERSLERPVATSPPGVQGSAVSGNTPSEKVWPEERLREMSMAAIKEYYSARDVKEVALCVSDLKSPSYHPSMISLWVTDSFERKDLERDLLAKLLVTLTKSYDGTLSQAQLIQGFKSVLSGLEDAVNDAPRAPEFLGRIFARVVTENVVFLEEIGQLLHEGGEEPGQLLEIGLAADVLGNTLEAIKMENGDAILSEIRSNSNLRLETFRPPKPVISRKLENFI 1847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01086 1847 MobiDBLite consensus disorder prediction 573 607 - -
Accr6g01086 1847 FunFam Eukaryotic translation initiation factor 4G 1653 1846 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 946 960 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 774 791 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 792 825 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 626 671 - -
Accr6g01086 1847 Gene3D - 1653 1847 - -
Accr6g01086 1847 Coils Coil 1301 1321 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 826 840 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 573 593 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 47 127 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 1085 1104 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 176 190 - -
Accr6g01086 1847 ProSiteProfiles MI domain profile. 1659 1783 IPR003891 -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 879 893 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 493 539 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 1493 1517 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 633 652 - -
Accr6g01086 1847 SUPERFAMILY ARM repeat 1213 1443 IPR016024 -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 174 256 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 704 725 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 1442 1555 - -
Accr6g01086 1847 Gene3D - 1219 1454 - -
Accr6g01086 1847 Pfam MIF4G domain 1219 1441 IPR003890 GO:0003723|GO:0005515
Accr6g01086 1847 MobiDBLite consensus disorder prediction 1442 1471 - -
Accr6g01086 1847 SUPERFAMILY ARM repeat 1655 1844 IPR016024 -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 1068 1114 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 961 975 - -
Accr6g01086 1847 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 358 1847 IPR045208 GO:0003743
Accr6g01086 1847 MobiDBLite consensus disorder prediction 986 1008 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 752 767 - -
Accr6g01086 1847 SMART ma3_7 1660 1774 IPR003891 -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 841 878 - -
Accr6g01086 1847 FunFam Eukaryotic translation initiation factor 4G 1219 1454 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 653 671 - -
Accr6g01086 1847 Pfam MA3 domain 1664 1771 IPR003891 -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 17 32 - -
Accr6g01086 1847 Coils Coil 1847 1847 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 241 256 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 1310 1334 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 1627 1653 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 402 421 - -
Accr6g01086 1847 Coils Coil 801 828 - -
Accr6g01086 1847 SMART if4_15 1219 1441 IPR003890 GO:0003723|GO:0005515
Accr6g01086 1847 MobiDBLite consensus disorder prediction 1 158 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 704 1008 - -
Accr6g01086 1847 MobiDBLite consensus disorder prediction 396 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01086 Accr-Chr6 30733205 30753092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01086 1 1846 Eukaryotic Initiation Factors Gene Family AT3G60240 43.905 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01086 K03260 - gmx:100796636 2150.94