Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01085 ATGAATTGCTTTCACTACTTCACTAGACATTGGAGGCGAAGGTCATTAGAATCTGAGCTTAAAGAAGAATTGAAGTCCCAAAACTCTAAGGTCAATGGAATTGCCAAATCTTTGTCGGCATCAATCTCACCACGTGGGATTCCGGAATTGTATGAAGAGAAGGCTCACAATTTGCGTGTTTTCTCCTTGGCTGAACTCCAGCGAGCCACGAATAATTTCAGTAGGCTTTTGAAGATTGGTGAAGGTGGGTTTGGGAGTGTATATAAAGGTTCAATCCAGGCCAATAAAAAGGAGTTTATTTCAGTTGCCATCAAGAGGCTTGACCCTGATGGATTCCAGGGTCATAAGCAATGGTTAGCTGAAGTTCAGTTTCTTGGTGTTGTGGAGCACCCAAATCTTGTGAAACTCATTGGATATTGCGCTGTGGATAATGAAAGAGGGATCCAGAGACTTCTTGTATATGAATACATGCCGAATAAAAGTTTGGAATATCATCTTTTTAACATGGCCTACGATCCTCTTCCTTGGAAAACAAGGCTTGAAATAGCCCTTGGAGCAGCTCGAGGGTTAGCCTATCTCCATGAAGAATTAGAAGTTCAGGTGATATATAGAGATTTTAAAACCTCAAATGTATTACTGGACGAAAATTTTAGGCCAAAACTTTCTGATTTTGGACTTGCTAGGGAGGGGCCAATAGCTGGGCATACTCATGTTTCAACTGCAGTCATGGGGACATATGGTTATGCTGCTCCAGATTACCTTGAGACAGGCCATCTCACTACAAAGAGTGATGTATGGAGTTTTGGTGTGGTTCTCTATGAAATTCTTACCGGGAGGCGATCGCTGGATCGAAACCGGCCAAAGACAGAGCAGAAACTCTTGGAGTGGGTGAAACTGCACCCTTCTAATAGAAGAAATTTCAGCTTGATAATTGATCCAAGACTTGAAGGCCAGTATTCCATAGACTTAGCGCGAAATGTCGCCAAGCTCGCAGATGATTGTCTGAGTAAAAGTGCAAAAGAGCGACCGAGGATGAGTCAGGTGGTGGAGAGATTGAGGCAGATAATCATAAATGCAGATGAATCTAATCCTGGTGAGAAAAATATTAACCTGTTTGAAAATGATGATTTGCTTGATCGAGAAGAAAAGTCAAATCAACCAAACCCTTCAAAATTGTGGCAAAGGAGGATGGCCCATCTTGCAAAACTTGGTGAGCCCGGGGAGACTGCTATAGGAAGAAGATTTATGACTCTACAAAAGACCAAATCTGGTTCTTAG 1278 0.4225 MNCFHYFTRHWRRRSLESELKEELKSQNSKVNGIAKSLSASISPRGIPELYEEKAHNLRVFSLAELQRATNNFSRLLKIGEGGFGSVYKGSIQANKKEFISVAIKRLDPDGFQGHKQWLAEVQFLGVVEHPNLVKLIGYCAVDNERGIQRLLVYEYMPNKSLEYHLFNMAYDPLPWKTRLEIALGAARGLAYLHEELEVQVIYRDFKTSNVLLDENFRPKLSDFGLAREGPIAGHTHVSTAVMGTYGYAAPDYLETGHLTTKSDVWSFGVVLYEILTGRRSLDRNRPKTEQKLLEWVKLHPSNRRNFSLIIDPRLEGQYSIDLARNVAKLADDCLSKSAKERPRMSQVVERLRQIIINADESNPGEKNINLFENDDLLDREEKSNQPNPSKLWQRRMAHLAKLGEPGETAIGRRFMTLQKTKSGS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01085 425 ProSitePatterns Protein kinases ATP-binding region signature. 79 105 IPR017441 GO:0005524
Accr6g01085 425 CDD STKc_IRAK 79 355 - -
Accr6g01085 425 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 48 156 - -
Accr6g01085 425 FunFam PTI1-like tyrosine-protein kinase 3 157 366 - -
Accr6g01085 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Accr6g01085 425 Gene3D Transferase(Phosphotransferase) domain 1 157 375 - -
Accr6g01085 425 Gene3D Phosphorylase Kinase; domain 1 47 156 - -
Accr6g01085 425 PANTHER OS01G0588500 PROTEIN-RELATED 31 355 - -
Accr6g01085 425 SUPERFAMILY Protein kinase-like (PK-like) 55 353 IPR011009 -
Accr6g01085 425 ProSiteProfiles Protein kinase domain profile. 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g01085 425 Pfam Protein kinase domain 75 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01085 Accr-Chr6 30695469 30699538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01085 1 352 Glycoside Hydrolase AT3G07070 45.580 6.59e-96 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr6g01085 Pkinase 5.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01085 - - gmx:100784625 580.096