Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01080 ATGTTCCGCCGCGCCACTACTTTGCTGGGTCGTCCACTTCTTGCTGCCAGGGCCCGCCGTTTCTCGACGGATCTCCCCGCCGCTCCCACAGCCGATTCCCAGTTCGTTGAAGCATGGAACAAGGTGGTTCCTAATTTGGACCCACCTAGGACTCCTTTGGCGTTCATGACCCCTCGCCCTGCTACTCCATCCTCGATCCCATCCAAGCTCACCGTCAATTTCATGCTCCCTTACTCTTCGGAAAAGTCCGGAAAAGAGGTTGACATGGTCATAATACCAGCCACAACTGGACAAATGGGTGTTCTTCCAGGACATGTAGCTACAATTGCAGAGTTGAAACCCGGGATTCTATCTGTGCATTCAGAGAATGAAGTGACCAAGTACTTTGTGAGTAGTGGCTTTGCTTTCATCCATGCAAACTCTGTTGCCGACATAGTAGCTGTTGAGGCCGTGCCAGTCGATCAAATTGACAGCAGCCTAGTTCAAAAGGGTCTCCAAGAATTTACCCAGAAGCTGAACTCTGCCACAACCGATTTGGAGAAGGCCGAGGCTCAGATTGGGATTGATGTTCATAGCGCACTCAATGCGGCTCTTTCAGGCTGA 603 0.5141 MFRRATTLLGRPLLAARARRFSTDLPAAPTADSQFVEAWNKVVPNLDPPRTPLAFMTPRPATPSSIPSKLTVNFMLPYSSEKSGKEVDMVIIPATTGQMGVLPGHVATIAELKPGILSVHSENEVTKYFVSSGFAFIHANSVADIVAVEAVPVDQIDSSLVQKGLQEFTQKLNSATTDLEKAEAQIGIDVHSALNAALSG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01080 200 Gene3D - 158 199 - -
Accr6g01080 200 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 29 199 IPR001469 GO:0015986|GO:0045261|GO:0046933
Accr6g01080 200 Hamap ATP synthase epsilon chain [atpC]. 68 188 IPR001469 GO:0015986|GO:0045261|GO:0046933
Accr6g01080 200 Gene3D - 64 157 IPR036771 -
Accr6g01080 200 Coils Coil 165 185 - -
Accr6g01080 200 CDD F1-ATPase_delta 70 193 IPR001469 GO:0015986|GO:0045261|GO:0046933
Accr6g01080 200 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 70 151 IPR036771 -
Accr6g01080 200 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 71 142 IPR020546 GO:0015986
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01080 Accr-Chr6 30570813 30575260 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01080 1 200 Primary Pumps ATPases AT5G47030 73.171 7.23e-107 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01080 K02134 - tcc:18614544 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g01080 6 30570813 30575260 Accr6g01080 6 30570813 30575260 ECH