Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01079 ATGTTCCGCCGCGCCACTACTTTGCTGGGTCGTCCACTTCTTGCTGCCAGGGCCCGCCGTTTCTCGACGGATCTCCCCGCCGCTCCCACAGCCGATTCCCAGTTCGTTGAAGCATGGAACAAGGTGGTTCCTAATTTGGACCCACCTAGGACTCCTTTGGCGTTCATGACCCCTCGCCCTGCTACTCCATCCTCGATCCCATCCAAGCTCACCGTCAATTTCATGCTCCCTTACTCTTCGGAAAAGTCCGGAAAAGAGGTTGGCTTTGAAATTGAGTTGCTGCGACGAATATTTGCTCTTGCAGACTTATTGGAAGATAAAGAGAAGGCATGGAATAGAGGATTGATTTTTAGTTTTGATGTTGACATGGTCATAATACCAGCCACAACTGGACAAATGGGTGTTCTTCCAGGACATGTAGCTACAATTGCAGAGTTGAAACCCGGGATTCTATCTGTGCATTCAGAGAATGAAGTGACCAAGTACTTTGTGAGTAGTGGCTTTGCTTTCATCCATGCAAACTCTGTTGCCGACATAGTAGCTGTTGAGGCCGTGCCAGTCGATCAAATTGACAGCAGCCTAGTTCAAAAGGGTCTCCAAGAATTTACCCAGAAGCTGAACTCTGCCACAACCGATTTGGAGAAGGCCGAGGCTCAGATTGGGATTGATGTTCATAGCGCACTCAATGCGGCTCTTTCAGGCTGA 705 0.4922 MFRRATTLLGRPLLAARARRFSTDLPAAPTADSQFVEAWNKVVPNLDPPRTPLAFMTPRPATPSSIPSKLTVNFMLPYSSEKSGKEVGFEIELLRRIFALADLLEDKEKAWNRGLIFSFDVDMVIIPATTGQMGVLPGHVATIAELKPGILSVHSENEVTKYFVSSGFAFIHANSVADIVAVEAVPVDQIDSSLVQKGLQEFTQKLNSATTDLEKAEAQIGIDVHSALNAALSG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01079 234 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 30 233 IPR001469 GO:0015986|GO:0045261|GO:0046933
Accr6g01079 234 NCBIfam ATP synthase F1 subunit epsilon 114 222 IPR001469 GO:0015986|GO:0045261|GO:0046933
Accr6g01079 234 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 115 185 IPR036771 -
Accr6g01079 234 Gene3D - 191 233 - -
Accr6g01079 234 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 114 176 IPR020546 GO:0015986
Accr6g01079 234 Hamap ATP synthase epsilon chain [atpC]. 91 222 IPR001469 GO:0015986|GO:0045261|GO:0046933
Accr6g01079 234 Gene3D - 111 190 IPR036771 -
Accr6g01079 234 Coils Coil 199 219 - -
Accr6g01079 234 CDD F1-ATPase_delta 114 227 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01079 Accr-Chr6 30570813 30575260 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01079 1 234 Primary Pumps ATPases AT5G47030 62.762 2.18e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01079 K02134 - tcc:18614544 310.842