Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01046 ATGAGCTTCTGCGTACCCACCTGGGATGTTGATAATAATGTTCCCTCAGCCACCAGGACCTCTGTTCCTTCTAACTCCAACTCCACTGTCCCTGATCTCATCCCTACGTTTGACTATGAAGTTGCAGAGCTTACATGGCAGAACGGGCAGATATGGATGAACGGGATGGGTCTGCCACGTCCTCCGGAGAAACCTATTACTTCAGGTGAAGCGGATAATGCAAGGTCCGATCTGTTCGCCTCCAATAATTCTAAGTATCGTGCTAGTGGTACTTTAGAGTCCATAGTCAATCAAGCTACTAGGTTCTCCCAGAATAGCAAATCACTGATGTCACAAAGTGTTGACGGAGACTGCCGCGGCGGTTGTGACGGAGACAAGTTGGTGCCACGGTTTAAATACCGACGCGGTGGTGGGGGCGGCTCTGGCGCTGCTGTATCAAACACAATGACTATGGATGCTTTGGTTCCTTGCTCGAATCGTACGGACGAGCAGAGTACGGCGATTGCAGTTGAATCTACGGGTGGAGGGATTGGCACGCGCGGTAGCGGATTGGGAATGGGTTGCTCAGCACATGTGGGGTCTTGTGGTTGTGGTGGAGGTGGTGTTGCGAGAGTCCCGGCGGTGGCGCGTATGCCTGTAGGCCGCCAGTGGGATCAAAGTGTAAGTGAGAGAGATAGCCATCACGTGACCCCTGACACGTGCGATAGGGAAATGGATGTGGGTGATACTTCTGCTTCAATGGGTTCGCCGGCAAACACCAGCTCCGTCCGGCCGTGCACAAAGACGACCGCCGCTGACGACCATGATTCTGTTTGCCACAGTACACAGAGAGATGAAGATGAGGAGGAGAACAAAAAAGAAAGGACTAAAAAATCTTCATCGTCCAACAAAGGGCGTAGAGCTGCTGATGTGCACAATCAATCTGAAAGAAAAAGGCGAGACAAGATCAACCAAAGGATGAAGACATTACAGAAGCTGGTTCCAAATTCCAGCAAGACTGATAAAGCTTCAATGCTGGATGAAGTAATAGACTATGTGAAGCAACTTCAAGCACAAGTGCAAATGATGAATAGAATGAGTCTATCTTCCATGATGTTGCCAATGACCCTGCAACAGCAACAACTTCAACTCATGTCCATGATGGCTCCAATGGGTATGGGATTGGGTATGGATATGAACACTATGGCCCGCCCTAACATCCCCACCCTCCCTCCGATTCTCCACCCTTCCACCGCTGCTGCCTTTATGCCGATGGCTGGCTCATGGGACCCGTCTACTGGCGGCAATCGGCTACAAGGAGCAGTGCCTGACTTCTGGTCATCATTTCTAGCATGCCAGACACAGCCCTTGACCATGGATGCATACAGTAGGATGGCTGCCATGTATCAGCAAATGCAGCAAGCTCCAGCATCTAGTTCCAAGAACTGA 1428 0.507 MSFCVPTWDVDNNVPSATRTSVPSNSNSTVPDLIPTFDYEVAELTWQNGQIWMNGMGLPRPPEKPITSGEADNARSDLFASNNSKYRASGTLESIVNQATRFSQNSKSLMSQSVDGDCRGGCDGDKLVPRFKYRRGGGGGSGAAVSNTMTMDALVPCSNRTDEQSTAIAVESTGGGIGTRGSGLGMGCSAHVGSCGCGGGGVARVPAVARMPVGRQWDQSVSERDSHHVTPDTCDREMDVGDTSASMGSPANTSSVRPCTKTTAADDHDSVCHSTQRDEDEEENKKERTKKSSSSNKGRRAADVHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIDYVKQLQAQVQMMNRMSLSSMMLPMTLQQQQLQLMSMMAPMGMGLGMDMNTMARPNIPTLPPILHPSTAAAFMPMAGSWDPSTGGNRLQGAVPDFWSSFLACQTQPLTMDAYSRMAAMYQQMQQAPASSSKN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01046 475 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 300 349 IPR011598 GO:0046983
Accr6g01046 475 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 41 474 IPR031066 -
Accr6g01046 475 Coils Coil 306 326 - -
Accr6g01046 475 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 304 370 IPR036638 GO:0046983
Accr6g01046 475 CDD bHLH_AtPIF_like 300 360 IPR047265 -
Accr6g01046 475 MobiDBLite consensus disorder prediction 245 261 - -
Accr6g01046 475 Pfam Helix-loop-helix DNA-binding domain 305 350 IPR011598 GO:0046983
Accr6g01046 475 MobiDBLite consensus disorder prediction 215 319 - -
Accr6g01046 475 MobiDBLite consensus disorder prediction 220 239 - -
Accr6g01046 475 MobiDBLite consensus disorder prediction 262 319 - -
Accr6g01046 475 SMART finulus 306 355 IPR011598 GO:0046983
Accr6g01046 475 FunFam transcription factor UNE10 isoform X1 295 360 - -
Accr6g01046 475 Gene3D - 295 360 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01046 Accr-Chr6 29059661 29063453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01046 1 456 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 44.328 6.99e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr6g01046 HLH 6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01046 - - dzi:111313267 385.956