Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01041 ATGGCTTTGGCCGTCAATCAGCAACAACCAAACTTAAAGCATTTCTGTAAGATCTGCAAGAAAGGTTTCGGGTGTGGGAGAGCACTCGGTGGACACATGAGAGCGCATGGCATCGGGGATGAGAGCTGGAACCTTGATGACGATGAGGATGCTGCGAGTGACTGGGAAGAAAAGTATGGCGGAGGCGCAGGAAATGAGCCACCCAGCACAAAGCGTACATATGCGCTAAGAACAAACCCTAAAAAGAGTTGTAGGGTATGTGAACATGGAAAGTGCATTTCCGATGAACACGCGGAGTCGTCACCAGTTTCTTCCGATAGTGATGATGACAATGATGGCGAGAGAGGTTGCAGTTTCTCTAAACGAAGGAGATCATCCAGAGCAGAAGTTGGTACGTCCAATTCCACATGTCCTCCAAGTGAAGAAGAAGACATGGCCGCCGCCTACTGTCTCATGATGTTATCAAACTCCAATGTCGGTCATCTCGCCATTACCACCCCAGCTGCTGAGCCAGAGGAATCTAGTGCTTCGGCTTGCAGGGATGAGGAGAGAAGAAATCTCATAAGCTTCGTCCCACCTATATCTTATTGTGTTCCTACCGTAGGGGACCACAAAGCCAAAAGTACGGCCGTTACTAAAGGCTTGTTTGAATGCAAAGCATGTAAAAAAGCCTTCAATTCTCATCAAGCATTAGGTGGCCATAGAGCAAGCCACAAAAAAGTTAAAGGCTGCTTCGCTTCCAGACTTGACAACCTTGAAGATAAGGACGATGATGACATAACTCAAGAAGAGTTTCTCGCCACAAAATCAAACTCAATGGCACATAAAGATCATCATCAAAACAATGCCACCTTATTGACCGCATCTTCATCGTCCAAAAGAAGATCCAAAGTTCATGAATGTTCTATATGTTACCGGAGTTTCTCGTCAGGACAAGCCCTAGGAGGACACAAGAGGTGTCATTGGATAACACCAAACGCACCAGATTCATCCACATTGGCTAGGTTTCAGCACTTTCAAGACCAAAGAGAGCGAATGAATCAGATTTCCAAGTTCGATAACTCAAAGTCACTCGATCTAAAGCTCGATCTCAACCTTCCGGCCCCAGCCGACGATCCAGCGCGGAAGAACTTGGCGACAGAAATTTTTTTACAGCCATGGTTAGGAGAGACTACGGAGATGAAGGAGAAGGATCAAAGTAGTAATATTAACAATAATAATACTTATAGTCAATGTCATAGCCCCAGCAACGGCGAATTACCCCTCCATGAAACTGAAAATGACAAAAGCGAAGAAGACAAAAATAATAACAATCACAAAACTGTGTCGAGGGAAAATGTTGAAGATGAAGCTGGTAATAAAGTGAAAAAGTTAGCGAAACTAAGTGAGCTAAAGGACATGAACATAGGAGGGAGTTCTTCCCCATGGTTGCAGGTGGGGATTGGTTCAACTACTGGTGTGGGAGCTGAACCATAA 1476 0.4505 MALAVNQQQPNLKHFCKICKKGFGCGRALGGHMRAHGIGDESWNLDDDEDAASDWEEKYGGGAGNEPPSTKRTYALRTNPKKSCRVCEHGKCISDEHAESSPVSSDSDDDNDGERGCSFSKRRRSSRAEVGTSNSTCPPSEEEDMAAAYCLMMLSNSNVGHLAITTPAAEPEESSASACRDEERRNLISFVPPISYCVPTVGDHKAKSTAVTKGLFECKACKKAFNSHQALGGHRASHKKVKGCFASRLDNLEDKDDDDITQEEFLATKSNSMAHKDHHQNNATLLTASSSSKRRSKVHECSICYRSFSSGQALGGHKRCHWITPNAPDSSTLARFQHFQDQRERMNQISKFDNSKSLDLKLDLNLPAPADDPARKNLATEIFLQPWLGETTEMKEKDQSSNINNNNTYSQCHSPSNGELPLHETENDKSEEDKNNNNHKTVSRENVEDEAGNKVKKLAKLSELKDMNIGGSSSPWLQVGIGSTTGVGAEP 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01041 491 MobiDBLite consensus disorder prediction 398 421 - -
Accr6g01041 491 MobiDBLite consensus disorder prediction 96 141 - -
Accr6g01041 491 PANTHER OS02G0659100 PROTEIN 6 485 - -
Accr6g01041 491 SUPERFAMILY beta-beta-alpha zinc fingers 296 322 IPR036236 -
Accr6g01041 491 SUPERFAMILY beta-beta-alpha zinc fingers 14 238 IPR036236 -
Accr6g01041 491 MobiDBLite consensus disorder prediction 467 481 - -
Accr6g01041 491 MobiDBLite consensus disorder prediction 394 454 - -
Accr6g01041 491 MobiDBLite consensus disorder prediction 96 128 - -
Accr6g01041 491 Pfam C2H2-type zinc finger 14 36 - -
Accr6g01041 491 Pfam C2H2-type zinc finger 216 240 - -
Accr6g01041 491 Pfam C2H2-type zinc finger 298 323 - -
Accr6g01041 491 MobiDBLite consensus disorder prediction 422 454 - -
Accr6g01041 491 ProSitePatterns Zinc finger C2H2 type domain signature. 218 238 IPR013087 -
Accr6g01041 491 ProSiteProfiles Zinc finger C2H2 type domain profile. 299 321 IPR013087 -
Accr6g01041 491 SMART c2h2final6 299 321 IPR013087 -
Accr6g01041 491 SMART c2h2final6 216 238 IPR013087 -
Accr6g01041 491 SMART c2h2final6 14 36 IPR013087 -
Accr6g01041 491 ProSitePatterns Zinc finger C2H2 type domain signature. 16 36 IPR013087 -
Accr6g01041 491 ProSitePatterns Zinc finger C2H2 type domain signature. 301 321 IPR013087 -
Accr6g01041 491 MobiDBLite consensus disorder prediction 467 491 - -
Accr6g01041 491 ProSiteProfiles Zinc finger C2H2 type domain profile. 216 243 IPR013087 -
Accr6g01041 491 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01041 Accr-Chr6 28730265 28731740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01041 212 362 C2H2 Transcription Factor Family AT1G02040 43.046 3.82e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr6g01041 zf-C2H2_6 1.7e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01041 - - ahf:112720137 494.582