Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01030 ATGGATTATTCCACTTACCAACAACATCAGCAGCAACAGGAACAAGGCTATGACTCATCTCAAAATCAAGCCTTGGATCAATCTTCGCAATCCTATTATGGCTACAACCAACAGTACGACCAGCAATATGCATACTATTCCAATCAAGATCAAGGAAGTTCATATGCCCACCAACAATACCAGCAAGAGGCCGCCTCTATTCACCCTCCTGGAGTTCCAATACCTCCTGAACAGGCTCAGATTCAAAATCAACAGTTTTCAAACCAGGATTCAGGCGCAGCACTTGGTGGTGCTATGAATCCAGCAGCTGCAGCTGTGGCGATAGCTGCTCTCTCGCAGCTCAATCAGTTTGCCGGAGACCCTCCGGTTGGGCAGCCTCGATATAGAGGCGGCGGCGGCAGGGGCAGTAGGCCATTTAGACGGGGAGGGCATGGCCGTTTCAATCACCGAGGCCGTCTGCCTTACCGCGGTGGGGGGCATGGTCATGGGGGTGGTAGGCACTTTCCATCTCAGTCTATAGAATTTGTACCTACTGCTGCTGGAGACACATTGGCGGCACAACCTTCATCATCAGTATCTAGGCCCCTTGTTCCAACTGCAACATTGCAGCCTCCATCACGTGATTTATGGTGTGAAGTTTGCAAGGTAGAGTGTAATTCTGCTGAGATTATGGAGCAGCATACGAATGGAAAGCGGCATAAAAAGAATTTGCAGGTACATGAGGAATTACAGAGGCGCAAAGCTATAAATGGGCAACAGAGTAGCCAGATACCCTCTTCTCAATTGAATGCAACAACCAAGGGTGCGAAAGCTCTTGAATTGAAGACAGAAGGGTGTCCAGATGAAAATAAGATCTCTGAAGCGACAGAAGACAATCCTAAGAATGAACTTGGTTTGCAGAACAATACCGGAAAAACTTCTGAATTTCTAGCTGATGAAGAGGAAAAACCCAAGGATGATTCGGCTCCAAGGGGTCGTGGTTTGAAGCGAAAGATGAGAGGAGGCAGAGGAGGTAGATACATGAGAAATAATGACGGGTCAAGAAGGCCAGTGGAACCTCCAAAACCTAAACAGGCTTTATCTTTCATATGTGAGTTGTGTAATGTTATATGTGAGTCCCAAGTTGTTTATGACAGTCATTTGGCTGGTAAAAAGCACCAATCTAATCTTAAACGTGTCCATGGGCACCAAGCCGTGCCCCAAGAAGCAGGGCCACAAGCACTTCCTCCATCTAACACCGGTGCTTTGTCTAATTCCATTGACATCAATGCTCTTGCAAATTCAATAAACACTCAAGTCCAACAAGGTGTTAATGATCCACAAGTCCTCTTGGCTCAGCTCGTAATGACTGTACTGTCTCAAGCTCAAGCATCAACAGCAGCCGCACCCGCAGGATTTGTAGCTGCTCAACCTTCAGCACTCATGGCAGCAACCGCCTCAAGTTATGGGCCACCATTTCAAAATGTCCTGCCAACACAACCATCCAAAAATTCTGCACATGATGGGAATGAAAATCCAACAGTGAGAGCAAAAGATCAGGTGCAAACTGACCCACCACAGGCTGATGCTCTTCAAACTGCGGGTGCAAGCTTGGAAACTGAAGAGAAGGTGCATAAAACGGCCGCAGAAAATCCAAGTGCAGCAAATGAGCAAGGACCTTCAGAAGGCAATGCTCCTACTTTGTAG 1686 0.4727 MDYSTYQQHQQQQEQGYDSSQNQALDQSSQSYYGYNQQYDQQYAYYSNQDQGSSYAHQQYQQEAASIHPPGVPIPPEQAQIQNQQFSNQDSGAALGGAMNPAAAAVAIAALSQLNQFAGDPPVGQPRYRGGGGRGSRPFRRGGHGRFNHRGRLPYRGGGHGHGGGRHFPSQSIEFVPTAAGDTLAAQPSSSVSRPLVPTATLQPPSRDLWCEVCKVECNSAEIMEQHTNGKRHKKNLQVHEELQRRKAINGQQSSQIPSSQLNATTKGAKALELKTEGCPDENKISEATEDNPKNELGLQNNTGKTSEFLADEEEKPKDDSAPRGRGLKRKMRGGRGGRYMRNNDGSRRPVEPPKPKQALSFICELCNVICESQVVYDSHLAGKKHQSNLKRVHGHQAVPQEAGPQALPPSNTGALSNSIDINALANSINTQVQQGVNDPQVLLAQLVMTVLSQAQASTAAAPAGFVAAQPSALMAATASSYGPPFQNVLPTQPSKNSAHDGNENPTVRAKDQVQTDPPQADALQTAGASLETEEKVHKTAAENPSAANEQGPSEGNAPTL 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01030 561 Gene3D Classic Zinc Finger 347 392 - -
Accr6g01030 561 Gene3D Classic Zinc Finger 199 242 - -
Accr6g01030 561 MobiDBLite consensus disorder prediction 139 156 - -
Accr6g01030 561 MobiDBLite consensus disorder prediction 124 171 - -
Accr6g01030 561 MobiDBLite consensus disorder prediction 486 561 - -
Accr6g01030 561 MobiDBLite consensus disorder prediction 308 327 - -
Accr6g01030 561 MobiDBLite consensus disorder prediction 544 561 - -
Accr6g01030 561 Pfam Zinc-finger of C2H2 type 362 386 - -
Accr6g01030 561 Pfam Zinc-finger of C2H2 type 210 233 - -
Accr6g01030 561 MobiDBLite consensus disorder prediction 1 71 - -
Accr6g01030 561 PANTHER OS06G0651300 PROTEIN-RELATED 6 487 - -
Accr6g01030 561 MobiDBLite consensus disorder prediction 274 291 - -
Accr6g01030 561 MobiDBLite consensus disorder prediction 293 307 - -
Accr6g01030 561 MobiDBLite consensus disorder prediction 394 414 - -
Accr6g01030 561 SUPERFAMILY beta-beta-alpha zinc fingers 348 393 IPR036236 -
Accr6g01030 561 MobiDBLite consensus disorder prediction 486 527 - -
Accr6g01030 561 SMART ZnF_U1_5 359 393 IPR003604 GO:0003676|GO:0008270
Accr6g01030 561 SMART ZnF_U1_5 206 240 IPR003604 GO:0003676|GO:0008270
Accr6g01030 561 MobiDBLite consensus disorder prediction 1 65 - -
Accr6g01030 561 MobiDBLite consensus disorder prediction 248 267 - -
Accr6g01030 561 SUPERFAMILY beta-beta-alpha zinc fingers 203 240 IPR036236 -
Accr6g01030 561 MobiDBLite consensus disorder prediction 246 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01030 Accr-Chr6 28154026 28162087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01030 362 390 C2H2 Transcription Factor Family AT5G61190 58.621 7.30e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01030 - - gmx:102666037 320.857