Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01022 ATGAAAAGGGAAGTGCAACTAGAGCCTCCAGTTGCGCAAAACCTTGGGGATTCCGACCCTCTACTCGATAATCAGGAGGAGGAGGAGGAAGAGCGGAAGGAGGTGGAGTGCCCCGGAAGCACGATTGAGATTAACAGTGAAGATGTCGAGGCTGGCTTACTTCCTTCTTGTCGAATTTGCCTGGAAAGCGATTCCGAGCCAGGTGATGAATTGATATCACCATGCTTGTGCAAGGGAACCCAACAGTTTGTCCATCGTTCATGCCTTGATCACTGGCGCTCAGTAAAGGAAGGGTTTGCCTTCTCACACTGCACCACTTGCAAAGCCCAATTTCATCTGCGAGTTGAATTGTTTGAGGACAACTCCTGGCGTAAAATAAAGTTTAGGCTTTTTGTGGCAAGGGATGTTTTCCTTGTATTTTTGGCCGTACAAACTGTGATTGCGGCAATGGGTGCCTTTGCATACCTCATGGACAAAGATGGGGCATTCAGGAACTCTTTCGATGATGGCTGGGATCGGATACTGTCTAACCATCCTATACCATTTTATTATACTATTGGAGTACTAGCCTTCTTTGTGCTGCTTGGATTTTTTGGTCTCATTCTACATTGTTCCTCCCTCAATGCCAATGACTCCGGAATGGCTGGGTGTCAGAACTGTTGTTATGGATGGGGCATTTTGGATTGCTTTCCTGCATCAATGGAGGCATGCTTTGCCCTTGTGGTTGTTTTCGTTGTCATCTTTGCAATTTTGGGTATAGCTTATAGTTTCCTCGCTGCCACCATGGCGATTCAAAGAATTTGGCAGAGACACTACCACATCCTGACCAAGAGGGAGCTAACTAAGGAATATGTCGTGGAAGATCTCCAAGGTTCTTATTCCCCACCAAAATTGGACCCAGAACATGAAGAGCGCTTGAAAATGCTCAAGCTTTTGTGA 939 0.4633 MKREVQLEPPVAQNLGDSDPLLDNQEEEEEERKEVECPGSTIEINSEDVEAGLLPSCRICLESDSEPGDELISPCLCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVELFEDNSWRKIKFRLFVARDVFLVFLAVQTVIAAMGAFAYLMDKDGAFRNSFDDGWDRILSNHPIPFYYTIGVLAFFVLLGFFGLILHCSSLNANDSGMAGCQNCCYGWGILDCFPASMEACFALVVVFVVIFAILGIAYSFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLQGSYSPPKLDPEHEERLKMLKLL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01022 312 MobiDBLite consensus disorder prediction 1 37 - -
Accr6g01022 312 SUPERFAMILY RING/U-box 55 112 - -
Accr6g01022 312 SMART ringv_2 56 108 IPR011016 GO:0008270
Accr6g01022 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 121 IPR013083 -
Accr6g01022 312 ProSiteProfiles Zinc finger RING-CH-type profile. 49 114 IPR011016 GO:0008270
Accr6g01022 312 Pfam RING-variant domain 57 107 IPR011016 GO:0008270
Accr6g01022 312 CDD RING_CH-C4HC3_MARCH 57 108 - -
Accr6g01022 312 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 15 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01022 Accr-Chr6 27456925 27469057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01022 1 312 C3H Transcription Factor Family AT1G11020 76.250 9.09e-166 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01022 - - zju:107432369 541.962